G130419


Basic Information

Item Value
gene id G130419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29840459 ~ 29840782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150303
tcaaaaacggaaaaattgggcgtgcaaaattattcagcccctactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150303 True 248 lncRNA 0.40 2 29840459 29840782

Neighbor

gene id symbol gene type direction distance location
LOC110486369 LOC106605449 coding upstream 6654 29815780 ~ 29833805 (+)
LOC110486333 LOC106605448 coding upstream 71832 29765682 ~ 29768627 (+)
LOC110486279 LOC106605442 coding upstream 142773 29685855 ~ 29697686 (+)
LOC110486269 LOC106580132 coding upstream 155309 29679207 ~ 29685150 (+)
LOC118936731 dcst2 coding upstream 178431 29654875 ~ 29662028 (+)
LOC110486403 LOC106580236 coding downstream 60075 29900857 ~ 29914741 (+)
gnrh-r LOC106605452 coding downstream 84954 29925736 ~ 29930354 (+)
LOC110486448 cr3l4 coding downstream 237866 30078648 ~ 30083392 (+)
LOC110486462 NA coding downstream 256389 30097171 ~ 30103693 (+)
LOC110486473 LOC106605459 coding downstream 274753 30115535 ~ 30168611 (+)
G130427 NA non-coding upstream 34328 29805174 ~ 29806131 (+)
G130424 NA non-coding upstream 40632 29799535 ~ 29799827 (+)
G130411 NA non-coding upstream 54516 29785704 ~ 29785943 (+)
G130410 NA non-coding upstream 55094 29785126 ~ 29785365 (+)
G130335 LOC106580167 non-coding upstream 95592 29726551 ~ 29744867 (+)
G130451 NA non-coding downstream 15194 29855976 ~ 29932819 (+)
G130468 NA non-coding downstream 39530 29880312 ~ 29891518 (+)
G130479 LOC106605450 non-coding downstream 51491 29892273 ~ 29900179 (+)
G130773 NA non-coding downstream 153135 29993917 ~ 29994140 (+)
G130414 NA other upstream 50628 29789576 ~ 29789831 (+)
G130308 NA other upstream 199363 29600026 ~ 29641096 (+)
G129155 NA other upstream 355329 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 362329 29424822 ~ 29478401 (+)
G131491 NA other downstream 859400 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 907273 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 1450688 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 1519654 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 2016866 31834170 ~ 31887572 (+)

Expression


Co-expression Network