Gene
RNA
| Item | Value |
|---|---|
| gene id | G130468 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 29880312 ~ 29891518 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ras GTPase-activating-like protein IQGAP3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150368 | True | 961 | lncRNA | 0.40 | 2 | 29880312 | 29891518 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486369 | LOC106605449 | coding | upstream | 46507 | 29815780 ~ 29833805 (+) |
| LOC110486333 | LOC106605448 | coding | upstream | 111685 | 29765682 ~ 29768627 (+) |
| LOC110486279 | LOC106605442 | coding | upstream | 182626 | 29685855 ~ 29697686 (+) |
| LOC110486269 | LOC106580132 | coding | upstream | 195162 | 29679207 ~ 29685150 (+) |
| LOC118936731 | dcst2 | coding | upstream | 218284 | 29654875 ~ 29662028 (+) |
| LOC110486403 | LOC106580236 | coding | downstream | 9339 | 29900857 ~ 29914741 (+) |
| gnrh-r | LOC106605452 | coding | downstream | 34218 | 29925736 ~ 29930354 (+) |
| LOC110486448 | cr3l4 | coding | downstream | 187130 | 30078648 ~ 30083392 (+) |
| LOC110486462 | NA | coding | downstream | 205653 | 30097171 ~ 30103693 (+) |
| LOC110486473 | LOC106605459 | coding | downstream | 224017 | 30115535 ~ 30168611 (+) |
| G130419 | NA | non-coding | upstream | 39530 | 29840459 ~ 29840782 (+) |
| G130427 | NA | non-coding | upstream | 74181 | 29805174 ~ 29806131 (+) |
| G130424 | NA | non-coding | upstream | 80485 | 29799535 ~ 29799827 (+) |
| G130411 | NA | non-coding | upstream | 94369 | 29785704 ~ 29785943 (+) |
| G130410 | NA | non-coding | upstream | 94947 | 29785126 ~ 29785365 (+) |
| G130479 | LOC106605450 | non-coding | downstream | 755 | 29892273 ~ 29900179 (+) |
| G130773 | NA | non-coding | downstream | 102399 | 29993917 ~ 29994140 (+) |
| G130879 | NA | non-coding | downstream | 263778 | 30155296 ~ 30156840 (+) |
| LOC110534650 | LOC106580339 | non-coding | downstream | 314540 | 30205700 ~ 30209797 (+) |
| G130414 | NA | other | upstream | 90481 | 29789576 ~ 29789831 (+) |
| G130308 | NA | other | upstream | 239216 | 29600026 ~ 29641096 (+) |
| G129155 | NA | other | upstream | 395182 | 29484633 ~ 29485130 (+) |
| LOC110534631 | LOC106580029 | other | upstream | 402182 | 29424822 ~ 29478401 (+) |
| G131491 | NA | other | downstream | 808664 | 30700182 ~ 30700623 (+) |
| G131517 | ccne2 | other | downstream | 856537 | 30748055 ~ 30749954 (+) |
| LOC110534710 | LOC106605356 | other | downstream | 1399952 | 31262054 ~ 31294577 (+) |
| eaf1 | LOC106581241 | other | downstream | 1468918 | 31360408 ~ 31366322 (+) |
| G132342 | LOC100136303 | other | downstream | 1966130 | 31834170 ~ 31887572 (+) |
