G131035


Basic Information

Item Value
gene id G131035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30074490 ~ 30075388 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150971
gactgtaaactctccttccagactcgcatcaaacttctccaatccaaagttaaatctagaattggcttcctatttcgcaacaaagcatccctcgtaaaactgaccatcctaccgatcctcgacttcggcgatgtcatttacaaaatagcttccaataccctactcaataaatgggatgcagtctatcacagtgccatccgttttgtcaccaaagccccatatattacccaccactgcgacctgtacgctctcattggctggccctcgcttcatactcgtcgccaaacccactggctccaggtcatccacaagaccctgctaggtaaagtccccccttatctcagctcgctggtcaccatggcagcacccacctgtagcacgcgctccagcaggtttatctctctggtcacccccaaaaccaattcttcctttggccgcctttccttccagttctctccgggacaatgactggaacgaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccagctgtcagagcagctcacagattactgcacctgtacatagcccatctataatttagacCAAACAACTACCTTTTCCCCTACTGtatctactttgcacattcttccactgcaaatctaccattccagtgttttacttgctatattgtatttacttcgccaccattgcctttttttgcctttacctcccttatctcacctcatttgctcacatcgtatatagacttattgttctactgtattattgactgtaagtttgttttactccatgtgtaactctgtgttgttgtatgtgtcgaactgctttgctttatcttggccgggtcgcaattgtaaatgagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150971 True 875 lncRNA 0.50 2 30074490 30075388

Neighbor

gene id symbol gene type direction distance location
slc39a1 zip1 coding downstream 5831 30062714 ~ 30068659 (-)
LOC110486432 LOC106580288 coding downstream 12090 30044707 ~ 30062400 (-)
LOC110486409 LOC106605454 coding downstream 32996 29995917 ~ 30041494 (-)
LOC110534642 LOC106605453 coding downstream 88394 29960662 ~ 29986096 (-)
iqgap3 LOC106605450 coding downstream 173725 29880225 ~ 29900765 (-)
tmem79b LOC106605462 coding upstream 149198 30224586 ~ 30249645 (-)
LOC110486577 pmvk coding upstream 273446 30348834 ~ 30352329 (-)
calb1 LOC106580458 coding upstream 289503 30364891 ~ 30382941 (-)
pnp4b LOC106605471 coding upstream 319464 30394852 ~ 30413773 (-)
LOC110486614 LOC106580462 coding upstream 405616 30481004 ~ 30484360 (-)
G131026 NA non-coding downstream 3750 30049251 ~ 30070740 (-)
G130996 NA non-coding downstream 29864 30041545 ~ 30044626 (-)
G131004 NA non-coding downstream 78883 29995336 ~ 29995607 (-)
G131002 NA non-coding downstream 82861 29991396 ~ 29991629 (-)
G130675 NA non-coding downstream 279910 29794352 ~ 29794580 (-)
G131037 NA non-coding upstream 2455 30077843 ~ 30078431 (-)
G131036 cr3l4 non-coding upstream 4246 30079634 ~ 30080205 (-)
G131119 LOC106605460 non-coding upstream 126500 30201888 ~ 30202381 (-)
G131120 NA non-coding upstream 129526 30204914 ~ 30205524 (-)
G131083 LOC100194668 non-coding upstream 136624 30212012 ~ 30214826 (-)
LOC110486376 LOC106605451 other downstream 195922 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 1596659 28475823 ~ 28533709 (-)
G129582 NA other downstream 1763758 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 1924504 27933389 ~ 28149986 (-)
G129250 NA other downstream 2307958 27766157 ~ 27766532 (-)
c2h8orf37 cssa05h8orf37 other upstream 814305 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 821638 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 1117031 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 1121685 31196917 ~ 31199241 (-)
G132197 NA other upstream 1460659 31536047 ~ 31543009 (-)

Expression


Co-expression Network