G131119 (LOC106605460)


Basic Information

Item Value
gene id G131119
gene name LOC106605460
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30201888 ~ 30202381 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151065
TGTTGCCATGGCAGCGAGAGCATCCTTTCCTCTTGTGTCTGCGAAGCTTGGCATCATGGCTGGCACCATGACAGAGGCAGAAGCAGTCCTTTTCTGGCCAATCACACTCCTTGTAGATGCCATGAGAACCCATCTTTCTCCTCCGGCTGCGACCTGTCATTGGTGGAATCTCTTCTTCCTCTAGATCAGGGAGGGTCACTTCTTCAAAACCACCACTTGCCCCTCCCCCTGACCCCAAGCCAACACCCTCGCCTCCGTCTATTCCGCCCCCTACCTCCTCTGGCCAACAAGCCTCTTCAAACTGCCCTGGACGGGCTGAGGGTGGGCGGAGCTCGTCAAAGAATACCCAGAATTCCCCTTGCAAGTGGGTGTGGCCTTTCAGGAGGGAGGACATCTGTGCTTTAA

Function

NR:

description
PREDICTED: GON-4-like protein isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151065 True 405 lncRNA 0.56 2 30201888 30202381

Neighbor

gene id symbol gene type direction distance location
slc39a1 zip1 coding downstream 133229 30062714 ~ 30068659 (-)
LOC110486432 LOC106580288 coding downstream 139488 30044707 ~ 30062400 (-)
LOC110486409 LOC106605454 coding downstream 160394 29995917 ~ 30041494 (-)
LOC110534642 LOC106605453 coding downstream 215792 29960662 ~ 29986096 (-)
iqgap3 LOC106605450 coding downstream 301123 29880225 ~ 29900765 (-)
tmem79b LOC106605462 coding upstream 22205 30224586 ~ 30249645 (-)
LOC110486577 pmvk coding upstream 146453 30348834 ~ 30352329 (-)
calb1 LOC106580458 coding upstream 162510 30364891 ~ 30382941 (-)
pnp4b LOC106605471 coding upstream 192471 30394852 ~ 30413773 (-)
LOC110486614 LOC106580462 coding upstream 278623 30481004 ~ 30484360 (-)
G131028 NA non-coding downstream 118539 30050310 ~ 30083349 (-)
G131036 cr3l4 non-coding downstream 121683 30079634 ~ 30080205 (-)
G131037 NA non-coding downstream 123457 30077843 ~ 30078431 (-)
G131035 NA non-coding downstream 126500 30074490 ~ 30075388 (-)
G131026 NA non-coding downstream 131148 30049251 ~ 30070740 (-)
G131120 NA non-coding upstream 2533 30204914 ~ 30205524 (-)
G131083 LOC100194668 non-coding upstream 9631 30212012 ~ 30214826 (-)
G131082 NA non-coding upstream 12618 30214999 ~ 30222052 (-)
G131147 NA non-coding upstream 58254 30260635 ~ 30260944 (-)
G131117 NA non-coding upstream 60188 30262569 ~ 30263466 (-)
LOC110486376 LOC106605451 other downstream 323320 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 1724057 28475823 ~ 28533709 (-)
G129582 NA other downstream 1891156 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 2051902 27933389 ~ 28149986 (-)
G129250 NA other downstream 2435356 27766157 ~ 27766532 (-)
c2h8orf37 cssa05h8orf37 other upstream 687312 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 694645 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 990038 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 994692 31196917 ~ 31199241 (-)
G132197 NA other upstream 1333666 31536047 ~ 31543009 (-)

Expression


Co-expression Network