G131117


Basic Information

Item Value
gene id G131117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30262569 ~ 30263466 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151060
GCCGGCCATCTTGCGCAGGAAGCTGAAGGTGCGTCCCAGAGGACTTcctgtcttctcccccctctcctccccgggGGGAGCACCCCTCAGTCCCTccgtccttctctcctccctccacctctctctctctctctcttcacccagcCGCTGCCTCTCTTCCTGCCTCCACAGCTCACCAAGCTCCTCATCCACACTGAGAAAGAGGTGAAGAGAAACATCCTTCCATAAGATGGGACGAGTTGGCGTTCAGCCTAGCTTAGAGGAAAAGGTGAGTTACTATGGGTATGTGTATCAAAAAGCAGTCAGTGACAGATGAGATCATGTGCTCTATAGGGTTGTGAGTGAACAACGGTCatcaagaagagagagagagagacaactcaCCTCTGTGTGGAACCCCCAAATACAGAGCCCAGGGAAGACTCTGACAGACAGACGGGACAGACGGGACAgacgagacagacagaacagacaggacagacagacagatacagagaggaagagagaggcagaaagcaGAAACAAAGGAAACAAACTTAGTCATCCCATTATCTCAAaaccatccattcatccatccacacacacacacacacacacacacacacgatcccaGAGAGATTGAAGTGCATCGCCTGAAAAGTGACAAACCTCTGTCTGCTCTGTAGCCTCTTGGCAAACACAGCTAATCCAAACGATGGCTGAGACCAAGAGTTAACAAACGCATGAAGGCAGACTAGGATGAAGTAACAGAAGACAGTTGATTAAAGACCATCAAGGAGTGATTAAAACGATCTCTGCCGATGCCGTGGAATGAAAGGATGAATAGTGAACATGCAAAAGGTGAaatgaagagagcgagagaggagataggagagccTGAGAACACAGCGCTTTCTGT

Function

NR:

description
rho guanine nucleotide exchange factor 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151060 True 898 lncRNA 0.51 1 30262569 30263466

Neighbor

gene id symbol gene type direction distance location
tmem79b LOC106605462 coding downstream 12924 30224586 ~ 30249645 (-)
slc39a1 zip1 coding downstream 193910 30062714 ~ 30068659 (-)
LOC110486432 LOC106580288 coding downstream 200169 30044707 ~ 30062400 (-)
LOC110486409 LOC106605454 coding downstream 221075 29995917 ~ 30041494 (-)
LOC110534642 LOC106605453 coding downstream 276473 29960662 ~ 29986096 (-)
LOC110486577 pmvk coding upstream 85368 30348834 ~ 30352329 (-)
calb1 LOC106580458 coding upstream 101425 30364891 ~ 30382941 (-)
pnp4b LOC106605471 coding upstream 131386 30394852 ~ 30413773 (-)
LOC110486614 LOC106580462 coding upstream 217538 30481004 ~ 30484360 (-)
aldh5a1 LOC106605473 coding upstream 240159 30503625 ~ 30509152 (-)
G131147 NA non-coding downstream 1625 30260635 ~ 30260944 (-)
G131082 NA non-coding downstream 40517 30214999 ~ 30222052 (-)
G131083 LOC100194668 non-coding downstream 47743 30212012 ~ 30214826 (-)
G131120 NA non-coding downstream 57045 30204914 ~ 30205524 (-)
G131119 LOC106605460 non-coding downstream 60188 30201888 ~ 30202381 (-)
G131150 NA non-coding upstream 2363 30265829 ~ 30266286 (-)
G131202 NA non-coding upstream 49535 30313001 ~ 30314155 (-)
G131207 NA non-coding upstream 58352 30321818 ~ 30322063 (-)
G131212 NA non-coding upstream 97684 30361150 ~ 30362058 (-)
G131161 NA non-coding upstream 129161 30392627 ~ 30393415 (-)
LOC110486376 LOC106605451 other downstream 384001 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 1784738 28475823 ~ 28533709 (-)
G129582 NA other downstream 1951837 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 2112583 27933389 ~ 28149986 (-)
G129250 NA other downstream 2496037 27766157 ~ 27766532 (-)
c2h8orf37 cssa05h8orf37 other upstream 626227 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 633560 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 928953 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 933607 31196917 ~ 31199241 (-)
G132197 NA other upstream 1272581 31536047 ~ 31543009 (-)

Expression


Co-expression Network