G130950


Basic Information

Item Value
gene id G130950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30325932 ~ 30326157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150880
ctcctgaacatctaatcaaatggctacccagactatttgcattgcccccctccccctcttttacacctctgctactctctgttgttttcatctatgcatagacactttaataactctacctacatgtacatattaactcaactaaccggtgtccccacacattgactctgtaccggtaccccctgtatatagtctcgctattgttattttactgctgctctttaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150880 True 226 lncRNA 0.42 1 30325932 30326157

Neighbor

gene id symbol gene type direction distance location
LOC110486559 LOC106605466 coding upstream 4811 30314585 ~ 30321121 (+)
LOC110486531 LOC106605464 coding upstream 14663 30261473 ~ 30311269 (+)
LOC110486525 LOC106605463 coding upstream 76618 30234520 ~ 30249314 (+)
LOC110486492 LOC100194668 coding upstream 111105 30210483 ~ 30214827 (+)
LOC118944173 NA coding upstream 111519 30214278 ~ 30214413 (+)
LOC110486570 LOC106580396 coding downstream 333 30326490 ~ 30349970 (+)
decr1 decr1 coding downstream 26611 30352768 ~ 30359695 (+)
LOC110534660 LOC106605472 coding downstream 159215 30485372 ~ 30505119 (+)
LOC110486625 LOC106605474 coding downstream 192286 30518443 ~ 30530346 (+)
LOC110486681 LOC106580557 coding downstream 206671 30532828 ~ 30542573 (+)
G130793 NA non-coding upstream 11982 30313247 ~ 30313950 (+)
G130921 NA non-coding upstream 71210 30254483 ~ 30254722 (+)
G130907 NA non-coding upstream 95251 30230438 ~ 30230681 (+)
G130906 NA non-coding upstream 96194 30229415 ~ 30229738 (+)
LOC110534650 LOC106580339 non-coding upstream 116202 30205700 ~ 30209797 (+)
G130947 NA non-coding downstream 38223 30364380 ~ 30364733 (+)
G130799 NA non-coding downstream 68032 30394189 ~ 30397680 (+)
G130988 NA non-coding downstream 103071 30429228 ~ 30429516 (+)
G130993 NA non-coding downstream 113775 30439932 ~ 30440195 (+)
G131262 NA non-coding downstream 129073 30455230 ~ 30455459 (+)
G130414 NA other upstream 536101 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 632081 29685855 ~ 29697686 (+)
G130308 NA other upstream 684836 29600026 ~ 29641096 (+)
G129155 NA other upstream 840802 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 847802 29424822 ~ 29478401 (+)
G131491 NA other downstream 374025 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 421898 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 965313 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 1034279 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1531491 31834170 ~ 31887572 (+)

Expression


Co-expression Network