G130947


Basic Information

Item Value
gene id G130947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30364380 ~ 30364733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150877
tgtcatgttggctggatgtcctttgggtggtggaccattcttgatacacacaggaactgttgagcgtgaaaactccagcagtgttgcagttgaCACAAAACGGCACGCCTGGCACCTACCAACATTCCCTGTTcgaaggcacttcaatcttttgtcttgcccgttcaccctctgaatggcacacatacccaATACATGTCTCGAGgattaaaaatcattctttaacctctcctccccttcatctacactgattgaagtgaatttaacaagtgacatcaataagggatcacagcttttacctagattcacctagtcagtctacgTCAAGGAAAGAGcttgtgttcttaatgtttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150877 True 354 lncRNA 0.44 1 30364380 30364733

Neighbor

gene id symbol gene type direction distance location
decr1 decr1 coding upstream 4685 30352768 ~ 30359695 (+)
LOC110486570 LOC106580396 coding upstream 14410 30326490 ~ 30349970 (+)
LOC110486559 LOC106605466 coding upstream 43259 30314585 ~ 30321121 (+)
LOC110486531 LOC106605464 coding upstream 53111 30261473 ~ 30311269 (+)
LOC110486525 LOC106605463 coding upstream 115066 30234520 ~ 30249314 (+)
LOC110534660 LOC106605472 coding downstream 120639 30485372 ~ 30505119 (+)
LOC110486625 LOC106605474 coding downstream 153710 30518443 ~ 30530346 (+)
LOC110486681 LOC106580557 coding downstream 168095 30532828 ~ 30542573 (+)
si:dkey-22o22.2 LOC106605377 coding downstream 253270 30618003 ~ 30746151 (+)
LOC110486724 LOC106581338 coding downstream 434047 30798780 ~ 30807966 (+)
G130950 NA non-coding upstream 38223 30325932 ~ 30326157 (+)
G130793 NA non-coding upstream 50430 30313247 ~ 30313950 (+)
G130921 NA non-coding upstream 109658 30254483 ~ 30254722 (+)
G130907 NA non-coding upstream 133699 30230438 ~ 30230681 (+)
G130906 NA non-coding upstream 134642 30229415 ~ 30229738 (+)
G130799 NA non-coding downstream 29456 30394189 ~ 30397680 (+)
G130988 NA non-coding downstream 64495 30429228 ~ 30429516 (+)
G130993 NA non-coding downstream 75199 30439932 ~ 30440195 (+)
G131262 NA non-coding downstream 90497 30455230 ~ 30455459 (+)
G131266 NA non-coding downstream 93996 30458729 ~ 30458957 (+)
G130414 NA other upstream 574549 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 670529 29685855 ~ 29697686 (+)
G130308 NA other upstream 723284 29600026 ~ 29641096 (+)
G129155 NA other upstream 879250 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 886250 29424822 ~ 29478401 (+)
G131491 NA other downstream 335449 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 383322 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 926737 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 995703 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1492915 31834170 ~ 31887572 (+)

Expression


Co-expression Network