G131161


Basic Information

Item Value
gene id G131161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30392627 ~ 30393415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151115
TAGCTGAGTGTAAAAAGTAGCTAATACACTATTAGTAAACTAATGATAATATGAATCTCCTGTCACCCTTAAGACATCATTAACATAGATCAGTGGCTTTTCACTCCCTGTTCATTTAGACAGAAATCATTCATGCTAACCTGGCAGGCCGAAACAAGGCTGGGGGTAGAACGCTTTCAATCTAAATCTTCCCTTTCGATTTTCATCCTCTCATGAGAATAAATAGTGTCAGGTTCCTCTTAGCCTTCTAGTCATTACCAAGGAATACTGTTCTCTAGTATTATTAAAATCACCAACATTAATAATTAGCAAATTATTGTAATTACACCAGAACTATTACCTTAAAATCCAAGGGGAAGTGAATTTATTAACAGGCTAATGTGGCAgtttatcagagagagagagacgatgttTGGCTGTTTTTCTCCTTTCTCTGTGTTGATTGCACTGCCTTGATGACTTGTATTGATGCTTAATGAGTTTGGTAATGTACAAAAACGTAAGCAGTATTTCCTCAAAATATTCAGCAGGACATGCTACCGCATGCTGTTCTTTAGAATGTCAATCGATCAAATGTATTTTGTAAATCATTAATGGCCTAGAAAAGCAGTAgcacattgtttaaaaaaaaaggtcaATAGAATGAAGGAACCTAGATATGAACCAGGCTCAGAGGGAAGGCCCATCCTCTTCTGGCTGAACggaatgttttgttttattaTGATAAGGTAATGCCACAAATGAGCAGAACACTTTGCtcttgataaataaataaatgtctacTATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151115 True 789 lncRNA 0.36 1 30392627 30393415

Neighbor

gene id symbol gene type direction distance location
calb1 LOC106580458 coding downstream 9686 30364891 ~ 30382941 (-)
LOC110486577 pmvk coding downstream 40298 30348834 ~ 30352329 (-)
tmem79b LOC106605462 coding downstream 142982 30224586 ~ 30249645 (-)
slc39a1 zip1 coding downstream 323968 30062714 ~ 30068659 (-)
LOC110486432 LOC106580288 coding downstream 330227 30044707 ~ 30062400 (-)
pnp4b LOC106605471 coding upstream 1437 30394852 ~ 30413773 (-)
LOC110486614 LOC106580462 coding upstream 87589 30481004 ~ 30484360 (-)
aldh5a1 LOC106605473 coding upstream 110210 30503625 ~ 30509152 (-)
LOC110486664 LOC106605475 coding upstream 116443 30509858 ~ 30518027 (-)
gbp LOC106605477 coding upstream 164145 30557560 ~ 30558960 (-)
G131212 NA non-coding downstream 30569 30361150 ~ 30362058 (-)
G131207 NA non-coding downstream 70564 30321818 ~ 30322063 (-)
G131202 NA non-coding downstream 78472 30313001 ~ 30314155 (-)
G131150 NA non-coding downstream 126341 30265829 ~ 30266286 (-)
G131117 NA non-coding downstream 129161 30262569 ~ 30263466 (-)
G131235 NA non-coding upstream 32361 30425776 ~ 30426224 (-)
G131236 NA non-coding upstream 34342 30427757 ~ 30428027 (-)
G131239 NA non-coding upstream 39863 30433278 ~ 30433506 (-)
G131241 NA non-coding upstream 41197 30434612 ~ 30434842 (-)
G131246 NA non-coding upstream 45638 30439053 ~ 30440223 (-)
LOC110486376 LOC106605451 other downstream 514059 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 1914796 28475823 ~ 28533709 (-)
G129582 NA other downstream 2081895 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 2242641 27933389 ~ 28149986 (-)
G129250 NA other downstream 2626095 27766157 ~ 27766532 (-)
c2h8orf37 cssa05h8orf37 other upstream 496278 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 503611 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 799004 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 803658 31196917 ~ 31199241 (-)
G132197 NA other upstream 1142632 31536047 ~ 31543009 (-)

Expression


Co-expression Network