G130799


Basic Information

Item Value
gene id G130799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30394189 ~ 30397680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150724
ctgtttattatctatatctactgtatgtttatttatatatgtatCTATATATTTACAATGGGAAAACCTTGTTATGAACACATCAGTGTTCTCCAAGCTTATCGCTACAGTGCAGAAGTTACCACTGCGCCATATTGGCTGAGGAGCCCTGTGAAAGATGGCAGTGTTTTCTTTATAGATGAATGCACTTCGATTTACTGTAAGGCAAGGCAGTGAACAGAGTATTTGCTTTGGCAAGATCCAAAGTTTTTCTGTACATTTTTTCTGTTGCTGTGTAAATTCTTACAAGAAACATTATTTCTACATGAGCTCTCACTGTTATTGCAGTCAAACTAACTCGTAACACTGTAATTGTTCTGCATGAAAATAGTTTTTTAATCAACTCTATGAAACAGACTTGTGTTGTCTGGTAAACACAGTGAAGCACATAAATAATAGTTTGATTCTCGTTCTAAACAGTGAGAGGATAACAAAGAAGAAAGCACTGTATAATTATATTAATACAGGACATGTTTTTTCTGTCACTAGCTCTGAATAGCAGGAGGAATTTGAAGAGAAAAGCACCATCATCTGTACATTAGTTCAGTTGCATATTTTTTTTCACACTATTTGTCATTAAATGCTATTTTCTGGTTGGAGGcttttcacatttttttttggggggggagagaAACATTTGGTGGAATTAATGTATaatctctgtcacgccctgaccttagagagcctttttatttctctttttggttaggtcggggtgtgatttgggtgggcattctagtttttctatttctttgttggccgggtatggttcccaatcagaggcagctgtctattgttgtctctgattggggatcatacttaggcagccttgtTTCCCACCTCGTTTATCTTTAGTTTTTTTGGTGTTCATCTAAATAaagatgtacgcttaccatgctgcgccttggtccgatccttcaaaCAACGATCTTCTGTTATGTCCGTTGtttgaaggatcggaccaaggcgcagcatggtaagcgtacatcttTCTTTATTTAGATAAAAACAACAAAAGATAAACGAACGTAAcgttctgcaggctacacagtaactgcacaaaaacaagatcccacaactgaaggtgggaaaaagggctgcctaagtatgatccccaatcagagacaacaaaccatactaggccaacaaagaaagTCACAGGGCgtgacaatctctctctctctctctctgaatttcCTCACgtaaggaaagggggatacctaggtTGGGTTAAaggcagaagacacatttcagttgaaggtgTTCAGTTGTTCAACTGGTAGTGGCACCCCTTCAGCTGATGTTAAATAGGAGCATTACGTATTCTCATGTCAGTGCCCTATCATCAAATAAGCATTTAATGTTTTAACAGACTGGttcttgtgtaaaaaaaaaaacaactttagAACATTTTATTAAACTGGAAAATGGACTAAATTCTTTCATCATGGGTGGTTGATTATTGTAAAGATTCACAGGGAATGATATGTACATGTTTGCACATGTCTGTGTACATTTCTGCGTgtttgtgagtgtctgtgtgtgagagagtgtgcttCAACATTagagtatgtctctgtctctttctccatccccctTCCTCCTTCAGTTGACATTGATGCCCTCGTCCAGCTGGTCTGAGCGGGCAATAAGTGTGTTGAGCATCATCTGCACATGCTCCGCCCTCATCTTGCTGATCTCCAGGACCTCCTCATGGTTCACCTTCTCCTCACGGCTGTAGTCCAGGGAGACCTTCACAATGATAATAAGAATACATTAAGATGCTCCGGTACCATACTCAATAACTAGTCAACAGATGACAGAATAGATACGCTGAGCTGTTCAGAGTGTGTGCAGATAAGGTACATCAAATGATATACAGCAATAAGAGAAGTCAATCAATACCTTGTTGGTGATGAGTGAGAGACCAAAGACCCTCAGGCCACAGTGCTTGGCCACTGTTACCTCTGGGACCGTACTCATGCCTATCGAGAAGAGGATAGGGGTTGGGGAGTGCAGACGAGGACAGGAGCGGAGGTTGGCAGGTTCATGGGGATGGAAAgcgagaggggtggggggggcagaGAAAAAATGGCAAAATATCCAACAGGGTTTGTGGGTGGCACCAGGTcatggttgtgtgtttgtgtgtgtgtagagaggtggTTATACTATTCAGCATTATTAATAACCCCCTCCGTGCACTTCCCCCTGAACTTTGGTCCCGTTCCCTGAGATTAGGTCCCATTCCCTGAGATTAGGTCCCATTCCCTGAGATTAGGTCCCATTCCCTGAGATTAGGTCCCATTCCATGAGATTAGGTCCCATTCCATGAGATTAGGTCCCATTCCCATGTTAGTATTTAATGGGAGCCCAGCCAGATCTCACATATCATTAAAACCATGCTAAAAACATGGATACAATTTACACAGGCACATACTGTACGAATGCAACGACAAAACAATGTTTACAGGCATAACCAAAAAGCATATGAATTAAAAATACTTATTAAGCCAAAGGtctcactcactcaaacacagCCTCCACTAAGCTGAAACTCTAGCATGGTAAAGAAAAAACACCACATAAAAAAATATGGATTGGCAGACGTGAATTGGACTCATTAAATAATACACCCACAGGAGTAATAACTCAAAACGTCATCAAAACAAGGAACCAAAGCGGGTTTTCTTTGTCATTGCTTGGCTACAACAACAAGCTCTTAAGGTAACAAGTCGGTAAAATACATGTTCTTAGGGGGAGTGGATCATGAAAGATGTCATTCGTTAGTTCTGCCCACTGTACATTGTAACAGATATTTGTGTTGCATTTTGATCCTGGATCAAATCATCAGACCAATTAGCGTCACAGCATGTTGGTCTATCTGTTGACCTAATCGCTAGGCTAATTAGCATGAGTCGGCTCTGTTAGCAGAGCTAGCACCATCATTTATTAACGAGCCCAGCATGGGTGTTTTTACGAGGGAGGTCCAATTAGAGCAGTGTTAATGAACTAAAAAGGGGAAAAGGAGAGTGAGCAAGCCTCGTCTGTGTTTGTATCGTTGTTAAACCATGTTGTGGCTGGTGGTCACTTGGCTCTCTGACAAAACATCCCCTTCCTGAGTAGATGCTTGATCTTGATACAGCATTTTGAAACACAAGTTGTATTAAATATCTAGCTATTGTTCCTTTAAACTTAAATTGAACCATTTCCTAACATTAACTGTGTTGTCTCCACTCACCCACAGAGTCGCACCCCAAGACCTGCAACATGCGTGCCTCAGCGATGGTCTCGAAGTTGGGCCCGCTCACCATGCAGTACACCCCTTCCCGCACAAAGTTGGTATAGTCCAGCTCATGACTGATATCTAGAGCTAGCTTCCTCAGGTCCTTACTGTAGGCATCTGACATGCAGGGGAACCGGATCCCAAACC

Function

NR:

description
purine nucleoside phosphorylase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150724 True 3472 lncRNA 0.42 2 30394189 30397680

Neighbor

gene id symbol gene type direction distance location
decr1 decr1 coding upstream 34494 30352768 ~ 30359695 (+)
LOC110486570 LOC106580396 coding upstream 44219 30326490 ~ 30349970 (+)
LOC110486559 LOC106605466 coding upstream 73068 30314585 ~ 30321121 (+)
LOC110486531 LOC106605464 coding upstream 82920 30261473 ~ 30311269 (+)
LOC110486525 LOC106605463 coding upstream 144875 30234520 ~ 30249314 (+)
LOC110534660 LOC106605472 coding downstream 87692 30485372 ~ 30505119 (+)
LOC110486625 LOC106605474 coding downstream 120763 30518443 ~ 30530346 (+)
LOC110486681 LOC106580557 coding downstream 135148 30532828 ~ 30542573 (+)
si:dkey-22o22.2 LOC106605377 coding downstream 220323 30618003 ~ 30746151 (+)
LOC110486724 LOC106581338 coding downstream 401100 30798780 ~ 30807966 (+)
G130947 NA non-coding upstream 29456 30364380 ~ 30364733 (+)
G130950 NA non-coding upstream 68032 30325932 ~ 30326157 (+)
G130793 NA non-coding upstream 80239 30313247 ~ 30313950 (+)
G130921 NA non-coding upstream 139467 30254483 ~ 30254722 (+)
G130907 NA non-coding upstream 163508 30230438 ~ 30230681 (+)
G130988 NA non-coding downstream 31548 30429228 ~ 30429516 (+)
G130993 NA non-coding downstream 42252 30439932 ~ 30440195 (+)
G131262 NA non-coding downstream 57550 30455230 ~ 30455459 (+)
G131266 NA non-coding downstream 61049 30458729 ~ 30458957 (+)
G131276 NA non-coding downstream 73479 30471159 ~ 30471613 (+)
G130414 NA other upstream 604358 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 700338 29685855 ~ 29697686 (+)
G130308 NA other upstream 753093 29600026 ~ 29641096 (+)
G129155 NA other upstream 909059 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 916059 29424822 ~ 29478401 (+)
G131491 NA other downstream 302502 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 350375 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 893790 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 962756 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1459968 31834170 ~ 31887572 (+)

Expression


Co-expression Network