G131235


Basic Information

Item Value
gene id G131235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30425776 ~ 30426224 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151203
ctcctatccttgttacacctgacgtctctagacagttcgttgtcgaggttgacgcgtcagaggtgggcgtgggagccattctttctcagcgctccctctctgacgacaaggtccacccatgtgcctatttttctcatcgcctgtcgccgtcggaacgtaactatgatgtgggtaaccgcgaactgctcgccatccggttagccctaggcgaatggcgacagtggttggagggggcgaccgttccttttgtcgtttggactgaccataggaaccttgagtacatccgttctgccaaacgacttaatgcgcgtcaggcgcgttgggcgctgtttttcgctcgtttcgagttcgtgatttcttatcgtccgggctctaagaacaccaagcctgatgctttgtctcgtctcttcagttcttcagtagcctccactgaccccgaggggattctc

Function

NR:

description
LOW QUALITY PROTEIN: uncharacterized protein LOC101167845

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151203 True 449 lncRNA 0.43 1 30425776 30426224

Neighbor

gene id symbol gene type direction distance location
pnp4b LOC106605471 coding downstream 12003 30394852 ~ 30413773 (-)
calb1 LOC106580458 coding downstream 42835 30364891 ~ 30382941 (-)
LOC110486577 pmvk coding downstream 73447 30348834 ~ 30352329 (-)
tmem79b LOC106605462 coding downstream 176131 30224586 ~ 30249645 (-)
slc39a1 zip1 coding downstream 357117 30062714 ~ 30068659 (-)
LOC110486614 LOC106580462 coding upstream 54780 30481004 ~ 30484360 (-)
aldh5a1 LOC106605473 coding upstream 77401 30503625 ~ 30509152 (-)
LOC110486664 LOC106605475 coding upstream 83634 30509858 ~ 30518027 (-)
gbp LOC106605477 coding upstream 131336 30557560 ~ 30558960 (-)
LOC110486705 ccne2 coding upstream 321831 30748055 ~ 30758543 (-)
G131161 NA non-coding downstream 32361 30392627 ~ 30393415 (-)
G131212 NA non-coding downstream 63718 30361150 ~ 30362058 (-)
G131207 NA non-coding downstream 103713 30321818 ~ 30322063 (-)
G131202 NA non-coding downstream 111621 30313001 ~ 30314155 (-)
G131150 NA non-coding downstream 159490 30265829 ~ 30266286 (-)
G131236 NA non-coding upstream 1533 30427757 ~ 30428027 (-)
G131239 NA non-coding upstream 7054 30433278 ~ 30433506 (-)
G131241 NA non-coding upstream 8388 30434612 ~ 30434842 (-)
G131246 NA non-coding upstream 12829 30439053 ~ 30440223 (-)
G131256 NA non-coding upstream 24867 30451091 ~ 30451453 (-)
LOC110486376 LOC106605451 other downstream 547208 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 1947945 28475823 ~ 28533709 (-)
G129582 NA other downstream 2115044 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 2275790 27933389 ~ 28149986 (-)
G129250 NA other downstream 2659244 27766157 ~ 27766532 (-)
c2h8orf37 cssa05h8orf37 other upstream 463469 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 470802 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 766195 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 770849 31196917 ~ 31199241 (-)
G132197 NA other upstream 1109823 31536047 ~ 31543009 (-)

Expression


Co-expression Network