G130988


Basic Information

Item Value
gene id G130988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30429228 ~ 30429516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150918
ccttgttcttcatgatgttctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacagagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgagtaaagggggtgaataattttgcacgcccaatttttcagtttttatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattatgtcccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150918 True 289 lncRNA 0.46 1 30429228 30429516

Neighbor

gene id symbol gene type direction distance location
decr1 decr1 coding upstream 69533 30352768 ~ 30359695 (+)
LOC110486570 LOC106580396 coding upstream 79258 30326490 ~ 30349970 (+)
LOC110486559 LOC106605466 coding upstream 108107 30314585 ~ 30321121 (+)
LOC110486531 LOC106605464 coding upstream 117959 30261473 ~ 30311269 (+)
LOC110486525 LOC106605463 coding upstream 179914 30234520 ~ 30249314 (+)
LOC110534660 LOC106605472 coding downstream 55856 30485372 ~ 30505119 (+)
LOC110486625 LOC106605474 coding downstream 88927 30518443 ~ 30530346 (+)
LOC110486681 LOC106580557 coding downstream 103312 30532828 ~ 30542573 (+)
si:dkey-22o22.2 LOC106605377 coding downstream 188487 30618003 ~ 30746151 (+)
LOC110486724 LOC106581338 coding downstream 369264 30798780 ~ 30807966 (+)
G130799 NA non-coding upstream 31548 30394189 ~ 30397680 (+)
G130947 NA non-coding upstream 64495 30364380 ~ 30364733 (+)
G130950 NA non-coding upstream 103071 30325932 ~ 30326157 (+)
G130793 NA non-coding upstream 115278 30313247 ~ 30313950 (+)
G130921 NA non-coding upstream 174506 30254483 ~ 30254722 (+)
G130993 NA non-coding downstream 10416 30439932 ~ 30440195 (+)
G131262 NA non-coding downstream 25714 30455230 ~ 30455459 (+)
G131266 NA non-coding downstream 29213 30458729 ~ 30458957 (+)
G131276 NA non-coding downstream 41643 30471159 ~ 30471613 (+)
G131286 NA non-coding downstream 44987 30474503 ~ 30474711 (+)
G130414 NA other upstream 639397 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 735377 29685855 ~ 29697686 (+)
G130308 NA other upstream 788132 29600026 ~ 29641096 (+)
G129155 NA other upstream 944098 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 951098 29424822 ~ 29478401 (+)
G131491 NA other downstream 270666 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 318539 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 861954 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 930920 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1428132 31834170 ~ 31887572 (+)

Expression


Co-expression Network