G130993


Basic Information

Item Value
gene id G130993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30439932 ~ 30440195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150923
gagggggtggaaaggtaacctaacaacgaccagcagagggagacagggtgaagggaaaggacagagacaagacacaacatgacagtacatgacagtacccccccactcaccgagcgcctcctggcgcactcgaggaggaaacctggcggcaacggaggaaatcctcgatcagcgcacggtccagcacgtcccgagagggaacccaactcctctcctcaggaccgtacccctcccaatccacgaggtactggtgaccacggcccc

Function

NR:

description
PREDICTED: thrombospondin-3b-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150923 True 264 lncRNA 0.61 1 30439932 30440195

Neighbor

gene id symbol gene type direction distance location
decr1 decr1 coding upstream 80237 30352768 ~ 30359695 (+)
LOC110486570 LOC106580396 coding upstream 89962 30326490 ~ 30349970 (+)
LOC110486559 LOC106605466 coding upstream 118811 30314585 ~ 30321121 (+)
LOC110486531 LOC106605464 coding upstream 128663 30261473 ~ 30311269 (+)
LOC110486525 LOC106605463 coding upstream 190618 30234520 ~ 30249314 (+)
LOC110534660 LOC106605472 coding downstream 45177 30485372 ~ 30505119 (+)
LOC110486625 LOC106605474 coding downstream 78248 30518443 ~ 30530346 (+)
LOC110486681 LOC106580557 coding downstream 92633 30532828 ~ 30542573 (+)
si:dkey-22o22.2 LOC106605377 coding downstream 177808 30618003 ~ 30746151 (+)
LOC110486724 LOC106581338 coding downstream 358585 30798780 ~ 30807966 (+)
G130988 NA non-coding upstream 10416 30429228 ~ 30429516 (+)
G130799 NA non-coding upstream 42252 30394189 ~ 30397680 (+)
G130947 NA non-coding upstream 75199 30364380 ~ 30364733 (+)
G130950 NA non-coding upstream 113775 30325932 ~ 30326157 (+)
G130793 NA non-coding upstream 125982 30313247 ~ 30313950 (+)
G131262 NA non-coding downstream 15035 30455230 ~ 30455459 (+)
G131266 NA non-coding downstream 18534 30458729 ~ 30458957 (+)
G131276 NA non-coding downstream 30964 30471159 ~ 30471613 (+)
G131286 NA non-coding downstream 34308 30474503 ~ 30474711 (+)
G131290 NA non-coding downstream 38557 30478752 ~ 30478977 (+)
G130414 NA other upstream 650101 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 746081 29685855 ~ 29697686 (+)
G130308 NA other upstream 798836 29600026 ~ 29641096 (+)
G129155 NA other upstream 954802 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 961802 29424822 ~ 29478401 (+)
G131491 NA other downstream 259987 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 307860 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 851275 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 920241 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1417453 31834170 ~ 31887572 (+)

Expression


Co-expression Network