G131304


Basic Information

Item Value
gene id G131304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30531809 ~ 30532025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151280
aagcatgggaaacagtgtttaaaccctttacaatgaagttaTTTAGATACGaattacgaattatctttgaaagacagggtcctgaaaaggggacgtttctttgctgagtttattaacTCTGTAGCCATATGAACTTGAAACCATCATTTTTGGTAGACACTGAACAGATAAACCTGGATCCTGATGTCCTGCATGTCACCTAGGGCCCATTATATCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC103399007, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151280 True 217 lncRNA 0.46 1 30531809 30532025

Neighbor

gene id symbol gene type direction distance location
LOC110486625 LOC106605474 coding upstream 1463 30518443 ~ 30530346 (+)
LOC110534660 LOC106605472 coding upstream 26690 30485372 ~ 30505119 (+)
decr1 decr1 coding upstream 172114 30352768 ~ 30359695 (+)
LOC110486570 LOC106580396 coding upstream 181839 30326490 ~ 30349970 (+)
LOC110486559 LOC106605466 coding upstream 210688 30314585 ~ 30321121 (+)
LOC110486681 LOC106580557 coding downstream 803 30532828 ~ 30542573 (+)
si:dkey-22o22.2 LOC106605377 coding downstream 85978 30618003 ~ 30746151 (+)
LOC110486724 LOC106581338 coding downstream 266755 30798780 ~ 30807966 (+)
plekhf2 plekhf2 coding downstream 289751 30821776 ~ 30844299 (+)
LOC110534679 LOC106605381 coding downstream 319272 30851297 ~ 30856046 (+)
G131295 NA non-coding upstream 43844 30487745 ~ 30487965 (+)
G131293 NA non-coding upstream 44870 30486700 ~ 30486939 (+)
G131290 NA non-coding upstream 52832 30478752 ~ 30478977 (+)
G131286 NA non-coding upstream 57098 30474503 ~ 30474711 (+)
G131315 NA non-coding downstream 16210 30548235 ~ 30548448 (+)
G131279 LOC106605477 non-coding downstream 25541 30557566 ~ 30572768 (+)
G131406 NA non-coding downstream 48947 30580972 ~ 30581270 (+)
G131416 NA non-coding downstream 57888 30589913 ~ 30590180 (+)
G131421 NA non-coding downstream 60640 30592665 ~ 30593696 (+)
G130414 NA other upstream 741978 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 837958 29685855 ~ 29697686 (+)
G130308 NA other upstream 890713 29600026 ~ 29641096 (+)
G129155 NA other upstream 1046679 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 1053679 29424822 ~ 29478401 (+)
G131491 NA other downstream 168157 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 216030 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 759445 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 828411 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1325623 31834170 ~ 31887572 (+)

Expression


Co-expression Network