Gene
RNA
| Item | Value |
|---|---|
| gene id | G131371 |
| gene name | LOC106580557 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30541589 ~ 30542541 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151352 | True | 953 | lncRNA | 0.51 | 1 | 30541589 | 30542541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486664 | LOC106605475 | coding | downstream | 23562 | 30509858 ~ 30518027 (-) |
| aldh5a1 | LOC106605473 | coding | downstream | 32437 | 30503625 ~ 30509152 (-) |
| LOC110486614 | LOC106580462 | coding | downstream | 57229 | 30481004 ~ 30484360 (-) |
| pnp4b | LOC106605471 | coding | downstream | 127816 | 30394852 ~ 30413773 (-) |
| calb1 | LOC106580458 | coding | downstream | 158648 | 30364891 ~ 30382941 (-) |
| gbp | LOC106605477 | coding | upstream | 15019 | 30557560 ~ 30558960 (-) |
| LOC110486705 | ccne2 | coding | upstream | 205514 | 30748055 ~ 30758543 (-) |
| LOC110486727 | tp53inp1 | coding | upstream | 218744 | 30761285 ~ 30773403 (-) |
| nagpa | LOC106605373 | coding | upstream | 236918 | 30779459 ~ 30798791 (-) |
| c2h8orf37 | cssa05h8orf37 | coding | upstream | 347274 | 30889693 ~ 30896340 (-) |
| G131368 | LOC106605476 | non-coding | downstream | 5096 | 30536211 ~ 30536493 (-) |
| G131366 | NA | non-coding | downstream | 8131 | 30533033 ~ 30533458 (-) |
| G131363 | NA | non-coding | downstream | 11268 | 30528409 ~ 30530321 (-) |
| G131362 | LOC106605474 | non-coding | downstream | 13297 | 30528010 ~ 30528292 (-) |
| G131360 | NA | non-coding | downstream | 14579 | 30525741 ~ 30527010 (-) |
| G131372 | NA | non-coding | upstream | 1388 | 30543929 ~ 30544198 (-) |
| G131419 | NA | non-coding | upstream | 48603 | 30591144 ~ 30591375 (-) |
| G131420 | NA | non-coding | upstream | 49316 | 30591857 ~ 30592124 (-) |
| G131436 | NA | non-coding | upstream | 59614 | 30602155 ~ 30602390 (-) |
| G131447 | NA | non-coding | upstream | 65865 | 30608406 ~ 30608639 (-) |
| LOC110486376 | LOC106605451 | other | downstream | 663021 | 29859575 ~ 29878744 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 2063758 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 2230857 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 2391603 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 2775057 | 27766157 ~ 27766532 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 354485 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 649878 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 654532 | 31196917 ~ 31199241 (-) |
| G132197 | NA | other | upstream | 993506 | 31536047 ~ 31543009 (-) |
