Gene
RNA
| Item | Value |
|---|---|
| gene id | G131372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30543929 ~ 30544198 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151353 | True | 270 | lncRNA | 0.44 | 1 | 30543929 | 30544198 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486664 | LOC106605475 | coding | downstream | 25902 | 30509858 ~ 30518027 (-) |
| aldh5a1 | LOC106605473 | coding | downstream | 34777 | 30503625 ~ 30509152 (-) |
| LOC110486614 | LOC106580462 | coding | downstream | 59569 | 30481004 ~ 30484360 (-) |
| pnp4b | LOC106605471 | coding | downstream | 130156 | 30394852 ~ 30413773 (-) |
| calb1 | LOC106580458 | coding | downstream | 160988 | 30364891 ~ 30382941 (-) |
| gbp | LOC106605477 | coding | upstream | 13362 | 30557560 ~ 30558960 (-) |
| LOC110486705 | ccne2 | coding | upstream | 203857 | 30748055 ~ 30758543 (-) |
| LOC110486727 | tp53inp1 | coding | upstream | 217087 | 30761285 ~ 30773403 (-) |
| nagpa | LOC106605373 | coding | upstream | 235261 | 30779459 ~ 30798791 (-) |
| c2h8orf37 | cssa05h8orf37 | coding | upstream | 345617 | 30889693 ~ 30896340 (-) |
| G131371 | LOC106580557 | non-coding | downstream | 1388 | 30541589 ~ 30542541 (-) |
| G131368 | LOC106605476 | non-coding | downstream | 7436 | 30536211 ~ 30536493 (-) |
| G131366 | NA | non-coding | downstream | 10471 | 30533033 ~ 30533458 (-) |
| G131363 | NA | non-coding | downstream | 13608 | 30528409 ~ 30530321 (-) |
| G131362 | LOC106605474 | non-coding | downstream | 15637 | 30528010 ~ 30528292 (-) |
| G131419 | NA | non-coding | upstream | 46946 | 30591144 ~ 30591375 (-) |
| G131420 | NA | non-coding | upstream | 47659 | 30591857 ~ 30592124 (-) |
| G131436 | NA | non-coding | upstream | 57957 | 30602155 ~ 30602390 (-) |
| G131447 | NA | non-coding | upstream | 64208 | 30608406 ~ 30608639 (-) |
| G131577 | NA | non-coding | upstream | 95446 | 30639644 ~ 30679587 (-) |
| LOC110486376 | LOC106605451 | other | downstream | 665361 | 29859575 ~ 29878744 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 2066098 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 2233197 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 2393943 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 2777397 | 27766157 ~ 27766532 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 352828 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 648221 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 652875 | 31196917 ~ 31199241 (-) |
| G132197 | NA | other | upstream | 991849 | 31536047 ~ 31543009 (-) |
