Gene
RNA
| Item | Value |
|---|---|
| gene id | G131620 |
| gene name | LOC106580611 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30719750 ~ 30719990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neural-cadherin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151625 | True | 241 | lncRNA | 0.38 | 1 | 30719750 | 30719990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gbp | LOC106605477 | coding | downstream | 160790 | 30557560 ~ 30558960 (-) |
| LOC110486664 | LOC106605475 | coding | downstream | 201723 | 30509858 ~ 30518027 (-) |
| aldh5a1 | LOC106605473 | coding | downstream | 210598 | 30503625 ~ 30509152 (-) |
| LOC110486614 | LOC106580462 | coding | downstream | 235390 | 30481004 ~ 30484360 (-) |
| pnp4b | LOC106605471 | coding | downstream | 305977 | 30394852 ~ 30413773 (-) |
| LOC110486705 | ccne2 | coding | upstream | 28065 | 30748055 ~ 30758543 (-) |
| LOC110486727 | tp53inp1 | coding | upstream | 41295 | 30761285 ~ 30773403 (-) |
| nagpa | LOC106605373 | coding | upstream | 59469 | 30779459 ~ 30798791 (-) |
| c2h8orf37 | cssa05h8orf37 | coding | upstream | 169825 | 30889693 ~ 30896340 (-) |
| trnas-aga | NA | coding | upstream | 174891 | 30894881 ~ 30894962 (-) |
| G131619 | NA | non-coding | downstream | 40 | 30719394 ~ 30719710 (-) |
| G131617 | NA | non-coding | downstream | 3712 | 30715819 ~ 30716038 (-) |
| G131610 | NA | non-coding | downstream | 12829 | 30706694 ~ 30706921 (-) |
| G131606 | NA | non-coding | downstream | 18455 | 30701081 ~ 30701295 (-) |
| G131605 | NA | non-coding | downstream | 20792 | 30698750 ~ 30698958 (-) |
| G131628 | LOC106605377 | non-coding | upstream | 8587 | 30728577 ~ 30728974 (-) |
| G131629 | NA | non-coding | upstream | 9442 | 30729432 ~ 30729647 (-) |
| G131630 | LOC106605377 | non-coding | upstream | 10734 | 30730724 ~ 30731301 (-) |
| G131661 | NA | non-coding | upstream | 90334 | 30810324 ~ 30810727 (-) |
| G131663 | NA | non-coding | upstream | 94683 | 30814673 ~ 30815862 (-) |
| LOC110486376 | LOC106605451 | other | downstream | 841182 | 29859575 ~ 29878744 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 2241919 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 2409018 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 2569764 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 2953218 | 27766157 ~ 27766532 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 177036 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 472429 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 477083 | 31196917 ~ 31199241 (-) |
| G132197 | NA | other | upstream | 816057 | 31536047 ~ 31543009 (-) |
