G131663


Basic Information

Item Value
gene id G131663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30814673 ~ 30815862 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151683
ataattacaaataatgtGTCGACTACAAATTTACCGCATGAAGCCCAAATAGATCATATTTGACTATAACAATCATTTCAAACATTGCTTACATTTGTTTACGATCACATACaatgagtataccaaacattaggaaaaccaatgcttcccacagtgtcaaattggctggatgtctttgggTGTCGGACTATTCTTGATTCACAAGGGAAACTGTTAAACGTGAATAACCCAGCCGCATTgtggttcttgacacaaaccggtgcgcctggcaactactaccataactcgttcaaaggcacttacattttttgtcttgcccattcaccctctgaatggcacacgtacacaatccatgtctcaattgtctcaaagtttaaaaatccttatttatttaactagtctcCTCCCCTTGATatacactaattgaagtggatttaatacagtgacatcaataagcgaccatagctttcacctagatttacctgctctgtctatgtcatggaaagaggtgttcttaatgttttgtctaaTCAGTGTATATTTCTCCGATTTTTGGAATACTTCGGAACAGACACCAAACAttcaaatcacttggagctgatttgccgGTGTTTTCCcagtattttatgtccaacaataaaaaataaaatgacatCATAAAAGCATAACACGTTTTCAAATATGATGGTAAAGCAGCTGTGTCCTAGGTTATGTCATGTTCAGTGCACACTTAGCCATTATGTGAAatgtggctgctgccaacacactgacactgactcaactccagccactttaataatgggaattgatgggaaatgatgtaaatatatcactagccactttaaacaatgctaccttatataaatgttacttaccctacattattcatctcatatgcatacgtatatactgtactctatatcatcgacggtatccttatgtaatacatgtatcactagccactttatactatgccactttgtttacatactcatctcatttgtacatgctgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagttagattacttgttattactgcattgttggaactagaagcacaagcatttcgcc
>TU151680
ataattacaaataatgtGTCGACTACAAATTTACCGCATGAAGCCCAAATAGATCATATTTGACTATAACAATCATTTCAAACATTGCTTACATTTGTTTACGATCACATACaatgagtataccaaacattaggaaaaccaatgcttcccacagtgtcaaattggctggatgtctttgggTGTCGGACTATTCTTGATTCACAAGGGAAACTGTTAAACGTGAATAACCCAGCCGCATTgtggttcttgacacaaaccggtgcgcctggcaactactaccataactcgttcaaaggcacttacattttttgtcttgcccattcaccctctgaatggcacacgtacacaatccatgtctcaattgtctcaaagtttaaaaatccttatttatttaactagtctcCTCCCCTTGATatacactaattgaagtggatttaatacagtgacatcaataagcgaccatagctttcacctagatttacctgctctgtctatgtcatggaaagaggtgttcttaatgttttgtctaaTCAGTGTATATTTCTCCGATTTTTGGAATACTTCGGAACAGACACCAAACAttcaaatcacttggagctgatttgccgGTGTTTTCCcagtattttatgtccaacaataaaaaataaaatgacatCATAAAAGCATAACACGTTTTCAAATATGATGGTAAAGCAGCTGTGTCCTAGGTTATGTCATGTTCAGTGCACACTTAGCCATTATGTGAAatgtggctgctgccaacacactgacactgactcaactccagccactttaataatgggaattgatgggaaatgatgtaaatatatcactagccactttaaacaatgctaccttatataaatgttacttaccctacattattcatctcatatgcatacgtatatactgtactctatatcatcgacggtatccttatgtaatacatgtatcactagccactttatactatgccactttgtttacatactcatctcatttgtacatgctgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatcccctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151683 False 1190 lncRNA 0.45 1 30814673 30815862
TU151680 True 1100 lncRNA 0.42 1 30814763 30815862

Neighbor

gene id symbol gene type direction distance location
nagpa LOC106605373 coding downstream 15882 30779459 ~ 30798791 (-)
LOC110486727 tp53inp1 coding downstream 41270 30761285 ~ 30773403 (-)
LOC110486705 ccne2 coding downstream 56130 30748055 ~ 30758543 (-)
gbp LOC106605477 coding downstream 255713 30557560 ~ 30558960 (-)
LOC110486664 LOC106605475 coding downstream 296646 30509858 ~ 30518027 (-)
c2h8orf37 cssa05h8orf37 coding upstream 73953 30889693 ~ 30896340 (-)
trnas-aga NA coding upstream 79019 30894881 ~ 30894962 (-)
trnas-aga-2 NA coding upstream 80281 30896143 ~ 30896224 (-)
trnae-cuc LOC106605367 coding upstream 81475 30897026 ~ 30899564 (-)
trnas-aga-3 NA coding upstream 95615 30911477 ~ 30911558 (-)
G131661 NA non-coding downstream 3946 30810324 ~ 30810727 (-)
G131630 LOC106605377 non-coding downstream 83372 30730724 ~ 30731301 (-)
G131629 NA non-coding downstream 85026 30729432 ~ 30729647 (-)
G131628 LOC106605377 non-coding downstream 85699 30728577 ~ 30728974 (-)
G131620 LOC106580611 non-coding downstream 94683 30719750 ~ 30719990 (-)
G131712 NA non-coding upstream 99476 30915338 ~ 30918439 (-)
G131723 NA non-coding upstream 285117 31100979 ~ 31101745 (-)
G132020 NA non-coding upstream 335729 31151591 ~ 31175420 (-)
LOC110486852 LOC106605360 non-coding upstream 379504 31192419 ~ 31196292 (-)
G132066 NA non-coding upstream 383542 31199404 ~ 31202388 (-)
LOC110486376 LOC106605451 other downstream 936105 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 2336842 28475823 ~ 28533709 (-)
G129582 NA other downstream 2503941 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 2664687 27933389 ~ 28149986 (-)
G129250 NA other downstream 3048141 27766157 ~ 27766532 (-)
LOC110486868 LOC106605361 other upstream 381211 31196917 ~ 31199241 (-)
G132197 NA other upstream 720185 31536047 ~ 31543009 (-)

Expression


Co-expression Network