G131556


Basic Information

Item Value
gene id G131556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30902804 ~ 30908231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151557
ggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagtttcccgaccatgcagtaatatctaacaagtaatcttacaatttcacaacaacaacCTTATACATACggccgaacagcataggcaagatgcagtagatggtatagagtacagcatatacatatgagatgagtaatgtagggtatataaacattatataaagtggcattctttaaagtggctagagatgagtcattatgttggcagcagccattcaatgttagtgatggctgtttaacagtctgttggccttgagatagaagcagttttTGAGTCTCTCTTTGAtttacctgtactgacctcgccttctggatgatagcgggatgaacagacaatggctcgggtggttgttgtccttgatgatctttttggccttcctgtgacatcgggtggtgtaggtgtcctggtgggcaggtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgtgggcggagctgttgccgtaccaggcggtgatacagcccgacaggatgctctcgattgtgcagctgtaaacgtttgtgagtgtttttggtgacaagccaaatttcttcagcctcctgaggttgaaaaggcgctgctgcgccttcttcgccacgctgtctgtgtgggtggaccatttcagtttgtccgtgatgtgtacgccgaggaactttccaccttctccactactgtcccgtcaatatGGATCGGgggcttctccctctgctgtttcctgaagtccacgatcatctcctttgttttgttgacattgagtgtgaggttattttcctgacaccacacttcctgacaccacactccgagggccctcacctcctccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151557 True 896 lncRNA 0.48 2 30902804 30908231

Neighbor

gene id symbol gene type direction distance location
LOC110534689 LOC106605368 coding upstream 11418 30873733 ~ 30891386 (+)
LOC110534679 LOC106605381 coding upstream 46758 30851297 ~ 30856046 (+)
plekhf2 plekhf2 coding upstream 58505 30821776 ~ 30844299 (+)
LOC110486724 LOC106581338 coding upstream 94838 30798780 ~ 30807966 (+)
si:dkey-22o22.2 LOC106605377 coding upstream 156653 30618003 ~ 30746151 (+)
LOC110486784 NA coding downstream 228577 31136808 ~ 31146454 (+)
sri sorcn coding downstream 291104 31199335 ~ 31202392 (+)
LOC110486889 NA coding downstream 300754 31208985 ~ 31222079 (+)
mxtx2 NA coding downstream 348286 31255824 ~ 31261130 (+)
LOC110534710 LOC106605356 coding downstream 353823 31262054 ~ 31294577 (+)
G131540 NA non-coding upstream 41710 30860556 ~ 30861094 (+)
G131527 NA non-coding upstream 87471 30814506 ~ 30815333 (+)
G131502 NA non-coding upstream 140890 30747628 ~ 30761914 (+)
G131494 NA non-coding upstream 193083 30709496 ~ 30709721 (+)
G131493 NA non-coding upstream 193320 30708874 ~ 30709484 (+)
G131719 NA non-coding downstream 147829 31056060 ~ 31056286 (+)
G131720 NA non-coding downstream 190969 31099200 ~ 31099445 (+)
G131721 NA non-coding downstream 192517 31100748 ~ 31100965 (+)
G131731 LOC100136479 non-coding downstream 198610 31106841 ~ 31175978 (+)
G131742 NA non-coding downstream 207911 31116142 ~ 31124644 (+)
G131517 ccne2 other upstream 152850 30748055 ~ 30749954 (+)
G131491 NA other upstream 202181 30700182 ~ 30700623 (+)
G130414 NA other upstream 1112973 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1208953 29685855 ~ 29697686 (+)
G130308 NA other upstream 1261708 29600026 ~ 29641096 (+)
eaf1 LOC106581241 other downstream 452205 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 949417 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 2259207 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2588223 33496454 ~ 33497285 (+)

Expression


Co-expression Network