G131719


Basic Information

Item Value
gene id G131719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31056060 ~ 31056286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151751
tgttggaaaacttgtcaataatcaattgactggctttcttgatgtctatagtattctctctggtatgcaatctgtttttttttgtctcatcCACTGCCTGTCACcgagggagtaccccaaggctcaatccttacttattgtttaaacagaaaacacaggagattggtggcacctcctagtggttaaagtgttggactagtaaccggaaggttgcaagttcaaatccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151751 True 227 lncRNA 0.43 1 31056060 31056286

Neighbor

gene id symbol gene type direction distance location
LOC110534689 LOC106605368 coding upstream 164674 30873733 ~ 30891386 (+)
LOC110534679 LOC106605381 coding upstream 200014 30851297 ~ 30856046 (+)
plekhf2 plekhf2 coding upstream 211761 30821776 ~ 30844299 (+)
LOC110486724 LOC106581338 coding upstream 248094 30798780 ~ 30807966 (+)
si:dkey-22o22.2 LOC106605377 coding upstream 309909 30618003 ~ 30746151 (+)
LOC110486784 NA coding downstream 80522 31136808 ~ 31146454 (+)
sri sorcn coding downstream 143049 31199335 ~ 31202392 (+)
LOC110486889 NA coding downstream 152699 31208985 ~ 31222079 (+)
mxtx2 NA coding downstream 200231 31255824 ~ 31261130 (+)
LOC110534710 LOC106605356 coding downstream 205768 31262054 ~ 31294577 (+)
G131556 NA non-coding upstream 147829 30902804 ~ 30908231 (+)
G131540 NA non-coding upstream 194966 30860556 ~ 30861094 (+)
G131527 NA non-coding upstream 240727 30814506 ~ 30815333 (+)
G131502 NA non-coding upstream 294146 30747628 ~ 30761914 (+)
G131494 NA non-coding upstream 346339 30709496 ~ 30709721 (+)
G131720 NA non-coding downstream 42914 31099200 ~ 31099445 (+)
G131721 NA non-coding downstream 44462 31100748 ~ 31100965 (+)
G131731 LOC100136479 non-coding downstream 50555 31106841 ~ 31175978 (+)
G131742 NA non-coding downstream 59856 31116142 ~ 31124644 (+)
G131773 NA non-coding downstream 131722 31188008 ~ 31188315 (+)
G131517 ccne2 other upstream 306106 30748055 ~ 30749954 (+)
G131491 NA other upstream 355437 30700182 ~ 30700623 (+)
G130414 NA other upstream 1266229 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1362209 29685855 ~ 29697686 (+)
G130308 NA other upstream 1414964 29600026 ~ 29641096 (+)
eaf1 LOC106581241 other downstream 304150 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 801362 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 2111152 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2440168 33496454 ~ 33497285 (+)

Expression


Co-expression Network