G131815


Basic Information

Item Value
gene id G131815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31252258 ~ 31252469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151863
GTTTATAACTTGAACGAGTTTTGTAATAAGATcaaaatgaataaaaacaaaAGTCATGTGACCTACCGATGAGGTGAATCAACCTGCTTGTCATGCTAATGTCGTGCGAATGACTGACAAAACATCACTTAAATTAAATGCACTAATCTTCTAAGCTTGTGAAATAGTCCACGTGACTCTGTGATAATGTGACACTTATAGCTCAGACACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151863 True 212 lncRNA 0.48 1 31252258 31252469

Neighbor

gene id symbol gene type direction distance location
LOC110486889 NA coding upstream 30179 31208985 ~ 31222079 (+)
sri sorcn coding upstream 49866 31199335 ~ 31202392 (+)
LOC110486784 NA coding upstream 105804 31136808 ~ 31146454 (+)
LOC110534689 LOC106605368 coding upstream 360872 30873733 ~ 30891386 (+)
LOC110534679 LOC106605381 coding upstream 396212 30851297 ~ 30856046 (+)
mxtx2 NA coding downstream 4048 31255824 ~ 31261130 (+)
LOC110534710 LOC106605356 coding downstream 9585 31262054 ~ 31294577 (+)
LOC110486933 can7 coding downstream 47533 31300002 ~ 31315913 (+)
eaf1 LOC106581241 coding downstream 107939 31360408 ~ 31366322 (+)
LOC110486995 atg5 coding downstream 337005 31589474 ~ 31624014 (+)
G131813 NA non-coding upstream 2425 31249619 ~ 31249833 (+)
G131794 NA non-coding upstream 23680 31228173 ~ 31228578 (+)
G131782 NA non-coding upstream 44023 31207976 ~ 31208235 (+)
G131777 NA non-coding upstream 56535 31195378 ~ 31195723 (+)
G131773 NA non-coding upstream 63943 31188008 ~ 31188315 (+)
G131835 NA non-coding downstream 43228 31295697 ~ 31295995 (+)
G131847 NA non-coding downstream 82813 31335282 ~ 31388272 (+)
G131886 LOC106584099 non-coding downstream 142620 31395089 ~ 31395472 (+)
G131517 ccne2 other upstream 502304 30748055 ~ 30749954 (+)
G131491 NA other upstream 551635 30700182 ~ 30700623 (+)
G130414 NA other upstream 1462427 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1558407 29685855 ~ 29697686 (+)
G130308 NA other upstream 1611162 29600026 ~ 29641096 (+)
G132342 LOC100136303 other downstream 605179 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1914969 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2243985 33496454 ~ 33497285 (+)

Expression


Co-expression Network