G131886 (LOC106584099)


Basic Information

Item Value
gene id G131886
gene name LOC106584099
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31395089 ~ 31395472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151939
cgttgttgccggtgacgtctggtgaggacctgccttacaactggcctacaagccctcagtccagcctctctcagcctattgcggaaagtctgagcactgatggagggattgtgcgttcctggtgtaactcgggcagttgttgttgccctcctgtacctgtcccaaagctgtgatgttcggatgtaccgatcctgtgcaggtgttgttaaacgtggtctgccactgcgaggacgatcagctgtccgtcctgtctccctgtagcactgtcttaggcgtctcacagtacggacattgcaatttattgccctggccacatctgcagtcctcatgcctccttgcagcatgcctaaggcacgttcatgcagatgagcagggaccctgggc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109630516

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151939 True 384 lncRNA 0.50 1 31395089 31395472

Neighbor

gene id symbol gene type direction distance location
eaf1 LOC106581241 coding upstream 28767 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 79176 31300002 ~ 31315913 (+)
LOC110534710 LOC106605356 coding upstream 100512 31262054 ~ 31294577 (+)
mxtx2 NA coding upstream 133959 31255824 ~ 31261130 (+)
LOC110486889 NA coding upstream 173010 31208985 ~ 31222079 (+)
LOC110486995 atg5 coding downstream 194002 31589474 ~ 31624014 (+)
LOC110534719 LOC106605346 coding downstream 446266 31841738 ~ 31857595 (+)
LOC110487037 LOC106605342 coding downstream 518208 31913680 ~ 31933154 (+)
LOC110487045 LOC106581064 coding downstream 546494 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 589887 31985359 ~ 31987549 (+)
G131847 NA non-coding upstream 6817 31335282 ~ 31388272 (+)
G131835 NA non-coding upstream 99094 31295697 ~ 31295995 (+)
G131815 NA non-coding upstream 142620 31252258 ~ 31252469 (+)
G131899 NA non-coding downstream 35846 31431318 ~ 31431552 (+)
G131901 NA non-coding downstream 39264 31434736 ~ 31434966 (+)
G131903 NA non-coding downstream 43925 31439397 ~ 31439623 (+)
G131909 NA non-coding downstream 66215 31461687 ~ 31461888 (+)
G131914 NA non-coding downstream 83455 31478927 ~ 31479289 (+)
G131517 ccne2 other upstream 645135 30748055 ~ 30749954 (+)
G131491 NA other upstream 694466 30700182 ~ 30700623 (+)
G130414 NA other upstream 1605258 29789576 ~ 29789831 (+)
G132342 LOC100136303 other downstream 462176 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1771966 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2100982 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 2418561 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2566945 33962417 ~ 33962658 (+)

Expression


Co-expression Network