Gene
RNA
| Item | Value |
|---|---|
| gene id | G132189 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31477272 ~ 31477716 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152294 | True | 445 | lncRNA | 0.41 | 1 | 31477272 | 31477716 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486958 | LOC106605352 | coding | downstream | 88723 | 31366329 ~ 31388549 (-) |
| LOC110486970 | metl6 | coding | downstream | 117053 | 31357834 ~ 31360219 (-) |
| LOC110486940 | LOC106605354 | coding | downstream | 124640 | 31317605 ~ 31352632 (-) |
| pkdc | LOC106605355 | coding | downstream | 177296 | 31298133 ~ 31299976 (-) |
| herpud2 | LOC106605359 | coding | downstream | 228399 | 31231353 ~ 31248873 (-) |
| LOC118939115 | NA | coding | upstream | 91505 | 31568460 ~ 31576243 (-) |
| trnap-agg-2 | NA | coding | upstream | 99072 | 31576788 ~ 31576859 (-) |
| LOC110486984 | nt5c3 | coding | upstream | 99729 | 31577445 ~ 31590842 (-) |
| dctn3 | LOC106605350 | coding | upstream | 114430 | 31592146 ~ 31595728 (-) |
| LOC110486999 | prdm1 | coding | upstream | 154170 | 31631886 ~ 31648795 (-) |
| G132188 | NA | non-coding | downstream | 676 | 31476289 ~ 31476596 (-) |
| G132184 | NA | non-coding | downstream | 6650 | 31470381 ~ 31470622 (-) |
| G132181 | NA | non-coding | downstream | 37820 | 31439184 ~ 31439452 (-) |
| G132180 | NA | non-coding | downstream | 38617 | 31438361 ~ 31438655 (-) |
| G132174 | NA | non-coding | downstream | 45719 | 31431198 ~ 31431553 (-) |
| G132212 | NA | non-coding | upstream | 14751 | 31492467 ~ 31492670 (-) |
| LOC118936732 | bbs9 | non-coding | upstream | 76742 | 31474894 ~ 31567154 (-) |
| G132246 | atg5 | non-coding | upstream | 119681 | 31597397 ~ 31604712 (-) |
| G132248 | NA | non-coding | upstream | 140321 | 31618037 ~ 31623113 (-) |
| LOC110486868 | LOC106605361 | other | downstream | 278460 | 31196917 ~ 31199241 (-) |
| LOC110486852 | LOC106605360 | other | downstream | 280980 | 31192419 ~ 31196292 (-) |
| trnae-cuc | LOC106605367 | other | downstream | 577708 | 30897026 ~ 30899564 (-) |
| c2h8orf37 | cssa05h8orf37 | other | downstream | 581289 | 30889693 ~ 30896340 (-) |
| LOC110486376 | LOC106605451 | other | downstream | 1598704 | 29859575 ~ 29878744 (-) |
| G132197 | NA | other | upstream | 58331 | 31536047 ~ 31543009 (-) |
| LOC110514821 | NA | other | upstream | 1261113 | 32738829 ~ 32756992 (-) |
| G134102 | NA | other | upstream | 1270492 | 32748208 ~ 32788121 (-) |
| LOC110487618 | LOC100380645 | other | upstream | 1734948 | 33208500 ~ 33225125 (-) |
