G131917


Basic Information

Item Value
gene id G131917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31484896 ~ 31485140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151970
ATGAAAAGGTAGAGGCCActgacatttttggtacccttccccagatctgtgcctcgacacagtcctgtctctgagctctacggacaattcctttgacttcatggcttggtttttgctctgacatgcactgtcaaccttatatagacaggtgtgtgcctttccaaatgatgttcaatcaattgaatttaacacaggtggactccaatcaagttgtagaaacatctcaaggatgatcaatggaaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151970 True 245 lncRNA 0.56 1 31484896 31485140

Neighbor

gene id symbol gene type direction distance location
eaf1 LOC106581241 coding upstream 118574 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 168983 31300002 ~ 31315913 (+)
LOC110534710 LOC106605356 coding upstream 190319 31262054 ~ 31294577 (+)
mxtx2 NA coding upstream 223766 31255824 ~ 31261130 (+)
LOC110486889 NA coding upstream 262817 31208985 ~ 31222079 (+)
LOC110486995 atg5 coding downstream 104334 31589474 ~ 31624014 (+)
LOC110534719 LOC106605346 coding downstream 356598 31841738 ~ 31857595 (+)
LOC110487037 LOC106605342 coding downstream 428540 31913680 ~ 31933154 (+)
LOC110487045 LOC106581064 coding downstream 456826 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 500219 31985359 ~ 31987549 (+)
G131914 NA non-coding upstream 5607 31478927 ~ 31479289 (+)
G131909 NA non-coding upstream 23008 31461687 ~ 31461888 (+)
G131903 NA non-coding upstream 45273 31439397 ~ 31439623 (+)
G131901 NA non-coding upstream 49930 31434736 ~ 31434966 (+)
G131899 NA non-coding upstream 53344 31431318 ~ 31431552 (+)
G131918 NA non-coding downstream 1045 31486185 ~ 31486431 (+)
G131923 NA non-coding downstream 19497 31504637 ~ 31504845 (+)
G131925 NA non-coding downstream 24402 31509542 ~ 31512142 (+)
G131946 NA non-coding downstream 53872 31539012 ~ 31539437 (+)
G131957 NA non-coding downstream 75470 31560610 ~ 31561380 (+)
G131517 ccne2 other upstream 734942 30748055 ~ 30749954 (+)
G131491 NA other upstream 784273 30700182 ~ 30700623 (+)
G130414 NA other upstream 1695065 29789576 ~ 29789831 (+)
G132342 LOC100136303 other downstream 372508 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1682298 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2011314 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 2328893 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2477277 33962417 ~ 33962658 (+)

Expression


Co-expression Network