Gene
RNA
| Item | Value |
|---|---|
| gene id | G131946 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31539012 ~ 31539437 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109086375, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152004 | True | 300 | lncRNA | 0.47 | 2 | 31539012 | 31539437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eaf1 | LOC106581241 | coding | upstream | 172690 | 31360408 ~ 31366322 (+) |
| LOC110486933 | can7 | coding | upstream | 223099 | 31300002 ~ 31315913 (+) |
| LOC110534710 | LOC106605356 | coding | upstream | 244435 | 31262054 ~ 31294577 (+) |
| mxtx2 | NA | coding | upstream | 277882 | 31255824 ~ 31261130 (+) |
| LOC110486889 | NA | coding | upstream | 316933 | 31208985 ~ 31222079 (+) |
| LOC110486995 | atg5 | coding | downstream | 50037 | 31589474 ~ 31624014 (+) |
| LOC110534719 | LOC106605346 | coding | downstream | 302301 | 31841738 ~ 31857595 (+) |
| LOC110487037 | LOC106605342 | coding | downstream | 374243 | 31913680 ~ 31933154 (+) |
| LOC110487045 | LOC106581064 | coding | downstream | 402529 | 31941966 ~ 31974601 (+) |
| LOC110487089 | LOC106581052 | coding | downstream | 445922 | 31985359 ~ 31987549 (+) |
| G131925 | NA | non-coding | upstream | 26870 | 31509542 ~ 31512142 (+) |
| G131923 | NA | non-coding | upstream | 34167 | 31504637 ~ 31504845 (+) |
| G131918 | NA | non-coding | upstream | 52581 | 31486185 ~ 31486431 (+) |
| G131917 | NA | non-coding | upstream | 53872 | 31484896 ~ 31485140 (+) |
| G131914 | NA | non-coding | upstream | 59723 | 31478927 ~ 31479289 (+) |
| G131957 | NA | non-coding | downstream | 21173 | 31560610 ~ 31561380 (+) |
| G131968 | NA | non-coding | downstream | 37630 | 31577067 ~ 31578629 (+) |
| G131970 | NA | non-coding | downstream | 52703 | 31592140 ~ 31592593 (+) |
| G131983 | NA | non-coding | downstream | 87558 | 31626995 ~ 31627345 (+) |
| G131988 | prdm1 | non-coding | downstream | 92527 | 31631964 ~ 31633994 (+) |
| G131517 | ccne2 | other | upstream | 789058 | 30748055 ~ 30749954 (+) |
| G131491 | NA | other | upstream | 838389 | 30700182 ~ 30700623 (+) |
| G130414 | NA | other | upstream | 1749181 | 29789576 ~ 29789831 (+) |
| G132342 | LOC100136303 | other | downstream | 318211 | 31834170 ~ 31887572 (+) |
| G133473 | LOC106605294 | other | downstream | 1628001 | 33167438 ~ 33169378 (+) |
| G133663 | LOC106605282 | other | downstream | 1957017 | 33496454 ~ 33497285 (+) |
| G133760 | LOC106605274 | other | downstream | 2274596 | 33814033 ~ 33814483 (+) |
| G134735 | LOC100136012 | other | downstream | 2422980 | 33962417 ~ 33962658 (+) |
