Gene
RNA
| Item | Value |
|---|---|
| gene id | G131968 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31577067 ~ 31578629 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein Z043_107991, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152032 | False | 1531 | lncRNA | 0.56 | 2 | 31577067 | 31578629 |
| TU152033 | True | 1529 | lncRNA | 0.49 | 2 | 31577067 | 31578629 |
31,575,600
31,576,000
31,576,400
31,576,800
31,577,200
31,577,600
31,578,000
31,578,400
31,578,800
31,579,200
31,579,200
31,579,600
31,580,000
31,580,400
31,580,800
31,581,200
31,581,600
31,582,000
31,582,400
31,582,800
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eaf1 | LOC106581241 | coding | upstream | 210745 | 31360408 ~ 31366322 (+) |
| LOC110486933 | can7 | coding | upstream | 261154 | 31300002 ~ 31315913 (+) |
| LOC110534710 | LOC106605356 | coding | upstream | 282490 | 31262054 ~ 31294577 (+) |
| mxtx2 | NA | coding | upstream | 315937 | 31255824 ~ 31261130 (+) |
| LOC110486889 | NA | coding | upstream | 354988 | 31208985 ~ 31222079 (+) |
| LOC110486995 | atg5 | coding | downstream | 10845 | 31589474 ~ 31624014 (+) |
| LOC110534719 | LOC106605346 | coding | downstream | 263109 | 31841738 ~ 31857595 (+) |
| LOC110487037 | LOC106605342 | coding | downstream | 335051 | 31913680 ~ 31933154 (+) |
| LOC110487045 | LOC106581064 | coding | downstream | 363337 | 31941966 ~ 31974601 (+) |
| LOC110487089 | LOC106581052 | coding | downstream | 406730 | 31985359 ~ 31987549 (+) |
| G131957 | NA | non-coding | upstream | 15687 | 31560610 ~ 31561380 (+) |
| G131946 | NA | non-coding | upstream | 37630 | 31539012 ~ 31539437 (+) |
| G131925 | NA | non-coding | upstream | 64925 | 31509542 ~ 31512142 (+) |
| G131923 | NA | non-coding | upstream | 72222 | 31504637 ~ 31504845 (+) |
| G131918 | NA | non-coding | upstream | 90636 | 31486185 ~ 31486431 (+) |
| G131970 | NA | non-coding | downstream | 13511 | 31592140 ~ 31592593 (+) |
| G131983 | NA | non-coding | downstream | 48366 | 31626995 ~ 31627345 (+) |
| G131988 | prdm1 | non-coding | downstream | 53335 | 31631964 ~ 31633994 (+) |
| G131998 | NA | non-coding | downstream | 78778 | 31657407 ~ 31657610 (+) |
| G132000 | NA | non-coding | downstream | 80624 | 31659253 ~ 31659535 (+) |
| G131517 | ccne2 | other | upstream | 827113 | 30748055 ~ 30749954 (+) |
| G131491 | NA | other | upstream | 876444 | 30700182 ~ 30700623 (+) |
| G130414 | NA | other | upstream | 1787236 | 29789576 ~ 29789831 (+) |
| G132342 | LOC100136303 | other | downstream | 279019 | 31834170 ~ 31887572 (+) |
| G133473 | LOC106605294 | other | downstream | 1588809 | 33167438 ~ 33169378 (+) |
| G133663 | LOC106605282 | other | downstream | 1917825 | 33496454 ~ 33497285 (+) |
| G133760 | LOC106605274 | other | downstream | 2235404 | 33814033 ~ 33814483 (+) |
| G134735 | LOC100136012 | other | downstream | 2383788 | 33962417 ~ 33962658 (+) |
