Gene
RNA
| Item | Value |
|---|---|
| gene id | G132011 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31695190 ~ 31695449 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152080 | True | 260 | lncRNA | 0.40 | 1 | 31695190 | 31695449 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486995 | atg5 | coding | upstream | 71176 | 31589474 ~ 31624014 (+) |
| eaf1 | LOC106581241 | coding | upstream | 328868 | 31360408 ~ 31366322 (+) |
| LOC110486933 | can7 | coding | upstream | 379277 | 31300002 ~ 31315913 (+) |
| LOC110534710 | LOC106605356 | coding | upstream | 400613 | 31262054 ~ 31294577 (+) |
| mxtx2 | NA | coding | upstream | 434060 | 31255824 ~ 31261130 (+) |
| LOC110534719 | LOC106605346 | coding | downstream | 146289 | 31841738 ~ 31857595 (+) |
| LOC110487037 | LOC106605342 | coding | downstream | 218231 | 31913680 ~ 31933154 (+) |
| LOC110487045 | LOC106581064 | coding | downstream | 246517 | 31941966 ~ 31974601 (+) |
| LOC110487089 | LOC106581052 | coding | downstream | 289910 | 31985359 ~ 31987549 (+) |
| LOC110534747 | LOC106605338 | coding | downstream | 292235 | 31987684 ~ 32027099 (+) |
| G132004 | NA | non-coding | upstream | 12495 | 31681888 ~ 31682695 (+) |
| G132002 | NA | non-coding | upstream | 25765 | 31669214 ~ 31669425 (+) |
| G132000 | NA | non-coding | upstream | 35655 | 31659253 ~ 31659535 (+) |
| G131998 | NA | non-coding | upstream | 37580 | 31657407 ~ 31657610 (+) |
| G131988 | prdm1 | non-coding | upstream | 61196 | 31631964 ~ 31633994 (+) |
| G132012 | NA | non-coding | downstream | 611 | 31696060 ~ 31696292 (+) |
| G132014 | NA | non-coding | downstream | 1397 | 31696846 ~ 31697080 (+) |
| G132311 | NA | non-coding | downstream | 67731 | 31763180 ~ 31847313 (+) |
| G132342 | LOC100136303 | non-coding | downstream | 138721 | 31834170 ~ 31887572 (+) |
| G132402 | NA | non-coding | downstream | 207591 | 31903040 ~ 31903689 (+) |
| G131517 | ccne2 | other | upstream | 945236 | 30748055 ~ 30749954 (+) |
| G131491 | NA | other | upstream | 994567 | 30700182 ~ 30700623 (+) |
| G130414 | NA | other | upstream | 1905359 | 29789576 ~ 29789831 (+) |
| G133473 | LOC106605294 | other | downstream | 1471989 | 33167438 ~ 33169378 (+) |
| G133663 | LOC106605282 | other | downstream | 1801005 | 33496454 ~ 33497285 (+) |
| G133760 | LOC106605274 | other | downstream | 2118584 | 33814033 ~ 33814483 (+) |
| G134735 | LOC100136012 | other | downstream | 2266968 | 33962417 ~ 33962658 (+) |
