G132012


Basic Information

Item Value
gene id G132012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31696060 ~ 31696292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152081
agacaggattgtgttgaggcacagatctggggaagggtaccaaaaaaattctgcagcattgaaggtccccaagaacacagtggcctccatcattcttaaatggaaaaagttttgaaccaccaagactcttcctagagctggccacccagtcaaactgagcaatcagggggaaggggaggtgaccaagaatccaatggtcactctgacagagctccagagttcctctgtggaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152081 True 233 lncRNA 0.49 1 31696060 31696292

Neighbor

gene id symbol gene type direction distance location
LOC110486995 atg5 coding upstream 72046 31589474 ~ 31624014 (+)
eaf1 LOC106581241 coding upstream 329738 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 380147 31300002 ~ 31315913 (+)
LOC110534710 LOC106605356 coding upstream 401483 31262054 ~ 31294577 (+)
mxtx2 NA coding upstream 434930 31255824 ~ 31261130 (+)
LOC110534719 LOC106605346 coding downstream 145446 31841738 ~ 31857595 (+)
LOC110487037 LOC106605342 coding downstream 217388 31913680 ~ 31933154 (+)
LOC110487045 LOC106581064 coding downstream 245674 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 289067 31985359 ~ 31987549 (+)
LOC110534747 LOC106605338 coding downstream 291392 31987684 ~ 32027099 (+)
G132011 NA non-coding upstream 611 31695190 ~ 31695449 (+)
G132004 NA non-coding upstream 13365 31681888 ~ 31682695 (+)
G132002 NA non-coding upstream 26635 31669214 ~ 31669425 (+)
G132000 NA non-coding upstream 36525 31659253 ~ 31659535 (+)
G131998 NA non-coding upstream 38450 31657407 ~ 31657610 (+)
G132014 NA non-coding downstream 554 31696846 ~ 31697080 (+)
G132311 NA non-coding downstream 66888 31763180 ~ 31847313 (+)
G132342 LOC100136303 non-coding downstream 137878 31834170 ~ 31887572 (+)
G132402 NA non-coding downstream 206748 31903040 ~ 31903689 (+)
G132407 NA non-coding downstream 216664 31912956 ~ 31913253 (+)
G131517 ccne2 other upstream 946106 30748055 ~ 30749954 (+)
G131491 NA other upstream 995437 30700182 ~ 30700623 (+)
G130414 NA other upstream 1906229 29789576 ~ 29789831 (+)
G133473 LOC106605294 other downstream 1471146 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1800162 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 2117741 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2266125 33962417 ~ 33962658 (+)

Expression


Co-expression Network