Gene
RNA
| Item | Value |
|---|---|
| gene id | G132305 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31712874 ~ 31713085 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152420 | True | 212 | lncRNA | 0.40 | 1 | 31712874 | 31713085 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486999 | prdm1 | coding | downstream | 64196 | 31631886 ~ 31648795 (-) |
| dctn3 | LOC106605350 | coding | downstream | 117146 | 31592146 ~ 31595728 (-) |
| LOC110486984 | nt5c3 | coding | downstream | 122032 | 31577445 ~ 31590842 (-) |
| trnap-agg-2 | NA | coding | downstream | 136015 | 31576788 ~ 31576859 (-) |
| LOC118939115 | NA | coding | downstream | 136631 | 31568460 ~ 31576243 (-) |
| LOC110487017 | LOC106605347 | coding | upstream | 52116 | 31765201 ~ 31777787 (-) |
| LOC100136303 | LOC100136303 | coding | upstream | 144609 | 31857694 ~ 31883061 (-) |
| LOC118939268 | NA | coding | upstream | 154012 | 31867097 ~ 31871227 (-) |
| LOC110534727 | LOC106581127 | coding | upstream | 175945 | 31889030 ~ 31892905 (-) |
| LOC110534740 | NA | coding | upstream | 184381 | 31897466 ~ 31906130 (-) |
| G132286 | NA | non-coding | downstream | 15924 | 31696749 ~ 31696950 (-) |
| G132279 | NA | non-coding | downstream | 35135 | 31677466 ~ 31677739 (-) |
| G132278 | NA | non-coding | downstream | 40198 | 31672227 ~ 31672676 (-) |
| G132248 | NA | non-coding | downstream | 89761 | 31618037 ~ 31623113 (-) |
| G132581 | LOC106605342 | non-coding | upstream | 200625 | 31913710 ~ 31915220 (-) |
| G132594 | NA | non-coding | upstream | 227631 | 31940716 ~ 31941065 (-) |
| G132612 | NA | non-coding | upstream | 265507 | 31978592 ~ 31979092 (-) |
| G132613 | NA | non-coding | upstream | 267365 | 31980450 ~ 31980955 (-) |
| G132614 | NA | non-coding | upstream | 268785 | 31981870 ~ 31982088 (-) |
| G132197 | NA | other | downstream | 169865 | 31536047 ~ 31543009 (-) |
| LOC110486868 | LOC106605361 | other | downstream | 514062 | 31196917 ~ 31199241 (-) |
| LOC110486852 | LOC106605360 | other | downstream | 516582 | 31192419 ~ 31196292 (-) |
| trnae-cuc | LOC106605367 | other | downstream | 813310 | 30897026 ~ 30899564 (-) |
| LOC110514821 | NA | other | upstream | 1025744 | 32738829 ~ 32756992 (-) |
| G134102 | NA | other | upstream | 1035123 | 32748208 ~ 32788121 (-) |
| LOC110487618 | LOC100380645 | other | upstream | 1499579 | 33208500 ~ 33225125 (-) |
| G134668 | NA | other | upstream | 2152403 | 33865488 ~ 33865937 (-) |
| G135575 | NA | other | upstream | 2891130 | 34604215 ~ 34604478 (-) |
