G132612


Basic Information

Item Value
gene id G132612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31978592 ~ 31979092 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152772
ATGTGAGGTAGTATGAAATCACGGCGACCAGTAACCTAAATAGTCTGAAATGGCTTACTCTCCCAGATCAGAGCAATagatgaaggagaagagaaaATAAAGCCATTTTGGACTATTGAAATACAGACCAGGGTTTTTGATGAATATTTCAGCTGCACTGTTATGGAAGAATCCACCTTTTATGTTTTGCAACTCGCCAACAACCCACTGACGATGGATAAAAAGTTCAGTATGACTCTGTCCACATGAGTATTATTTCATTGTTTGTCAGTACATTCTTTCAGCCTCCAGTTCCAGTACATTGCAACACTCTGTTTTAgcatgtatactgtatgtcagtATAGTCCTGTACAGTGATAGAGGTGTGGCGATGTTTGACCCTGGGCTTAGGGAGTGCACACCTTGGCTGTCCGTGGTCGTGTCCTATAACCACTGGGGTCGATGGTCGGTAAGGACCGTGTACTAAGGGGGCTGTACATAGGACAGGGTTGCGAAGGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152772 True 501 lncRNA 0.47 1 31978592 31979092

Neighbor

gene id symbol gene type direction distance location
LOC110534740 NA coding downstream 72462 31897466 ~ 31906130 (-)
LOC110534727 LOC106581127 coding downstream 85687 31889030 ~ 31892905 (-)
LOC100136303 LOC100136303 coding downstream 95531 31857694 ~ 31883061 (-)
LOC118939268 NA coding downstream 107365 31867097 ~ 31871227 (-)
LOC110487017 LOC106605347 coding downstream 200805 31765201 ~ 31777787 (-)
LOC110487053 LOC106605337 coding upstream 48134 32027226 ~ 32056238 (-)
LOC110487099 NA coding upstream 89726 32068818 ~ 32075136 (-)
LOC110487106 LOC106605335 coding upstream 116439 32095531 ~ 32218170 (-)
lysmd1 LOC106605332 coding upstream 389530 32368622 ~ 32370951 (-)
LOC110487143 tmod4 coding upstream 395530 32374622 ~ 32387882 (-)
G132594 NA non-coding downstream 37527 31940716 ~ 31941065 (-)
G132581 LOC106605342 non-coding downstream 63372 31913710 ~ 31915220 (-)
G132305 NA non-coding downstream 265507 31712874 ~ 31713085 (-)
G132286 NA non-coding downstream 281642 31696749 ~ 31696950 (-)
G132279 NA non-coding downstream 300853 31677466 ~ 31677739 (-)
G132613 NA non-coding upstream 1358 31980450 ~ 31980955 (-)
G132614 NA non-coding upstream 2778 31981870 ~ 31982088 (-)
G132615 NA non-coding upstream 3423 31982515 ~ 31982840 (-)
G132617 NA non-coding upstream 6047 31985139 ~ 31985372 (-)
G132631 NA non-coding upstream 19715 31998807 ~ 32045508 (-)
LOC110486999 prdm1 other downstream 329797 31631886 ~ 31648795 (-)
G132197 NA other downstream 435583 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 779780 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 782300 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 1079028 30897026 ~ 30899564 (-)
LOC110514821 NA other upstream 759737 32738829 ~ 32756992 (-)
G134102 NA other upstream 769116 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 1233572 33208500 ~ 33225125 (-)
G134668 NA other upstream 1886396 33865488 ~ 33865937 (-)
G135575 NA other upstream 2625123 34604215 ~ 34604478 (-)

Expression


Co-expression Network