G132613


Basic Information

Item Value
gene id G132613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31980450 ~ 31980955 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152773
CTGAAAGAAGCAGTGAAACTGTGATCCCCTGCTCCATATGCTTCCCATGCCGTATGTCTTCGTTCTGTGGTTATGAATAGAAAAGTAATCTTTAGATAGCCACACAGAAACCCACAAGAAACAGTTCATGTTAACAGAGAAATTGTTTTACTTTATTGTATAGAAACAATTATTTTGTTTATATCATAAAAACATAAGCATTGAGTATAATTTCACAGTTATTATAGTGCATTCGAAaataattcagacccctttactttttccacattttgttacgttacagccttattctaaaattgattttttttaaatattcctcatcaatctacacacaatgacaaagcaaaaacaggtttttataaaattttggacatttaaaaaatgtttaaaactgaaattcacatttgcataagtattctgaccctttactcagtactttgttgaagcacctttagcagcgattacagcctggagtcttcttgggtatgacgctacaagcatggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152773 True 506 lncRNA 0.33 1 31980450 31980955

Neighbor

gene id symbol gene type direction distance location
LOC110534740 NA coding downstream 74320 31897466 ~ 31906130 (-)
LOC110534727 LOC106581127 coding downstream 87545 31889030 ~ 31892905 (-)
LOC100136303 LOC100136303 coding downstream 97389 31857694 ~ 31883061 (-)
LOC118939268 NA coding downstream 109223 31867097 ~ 31871227 (-)
LOC110487017 LOC106605347 coding downstream 202663 31765201 ~ 31777787 (-)
LOC110487053 LOC106605337 coding upstream 46271 32027226 ~ 32056238 (-)
LOC110487099 NA coding upstream 87863 32068818 ~ 32075136 (-)
LOC110487106 LOC106605335 coding upstream 114576 32095531 ~ 32218170 (-)
lysmd1 LOC106605332 coding upstream 387667 32368622 ~ 32370951 (-)
LOC110487143 tmod4 coding upstream 393667 32374622 ~ 32387882 (-)
G132612 NA non-coding downstream 1358 31978592 ~ 31979092 (-)
G132594 NA non-coding downstream 39385 31940716 ~ 31941065 (-)
G132581 LOC106605342 non-coding downstream 65230 31913710 ~ 31915220 (-)
G132305 NA non-coding downstream 267365 31712874 ~ 31713085 (-)
G132286 NA non-coding downstream 283500 31696749 ~ 31696950 (-)
G132614 NA non-coding upstream 915 31981870 ~ 31982088 (-)
G132615 NA non-coding upstream 1560 31982515 ~ 31982840 (-)
G132617 NA non-coding upstream 4184 31985139 ~ 31985372 (-)
G132631 NA non-coding upstream 17852 31998807 ~ 32045508 (-)
G133048 NA non-coding upstream 325987 32306942 ~ 32307262 (-)
LOC110486999 prdm1 other downstream 331655 31631886 ~ 31648795 (-)
G132197 NA other downstream 437441 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 781638 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 784158 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 1080886 30897026 ~ 30899564 (-)
LOC110514821 NA other upstream 757874 32738829 ~ 32756992 (-)
G134102 NA other upstream 767253 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 1231709 33208500 ~ 33225125 (-)
G134668 NA other upstream 1884533 33865488 ~ 33865937 (-)
G135575 NA other upstream 2623260 34604215 ~ 34604478 (-)

Expression


Co-expression Network