G132631


Basic Information

Item Value
gene id G132631
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31998807 ~ 32045508 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152794
GGTTGAGGGCATCCTGGCTCTCTAGGTGTGTGGTGAGAGTGACGTGTGTGGCGTTGCATCCTTGTCCTTCAAGGACGGGCATGTCTGCGGCCGCATCCATAGTGGACGCTGTGCATTACGACATCGGCTGGAGCGACCTGGGGGGCCTGTCCAGAGCAGCAAAACACACAGTACAGAGACGTGGTTCGGTCTTTGTTTGACCATGGCAATGATGCGCATGGCTCCCCTTCCCCTGTGGTCCTTGTATGCAGACACCATTAGATGCGTTGAAACCTTGactggtgttatagtgtatttgGCAGTGTGAACAGGGCAGCTAGAGTGGAAAGGGGGAGGAATGGCGCAAGCTTGAATAGAGTTGGTCCTGAAAGTCACCAATGGCCCTAGTGTGACACTCAGACACAGGATGATCAAACAGACTTTCCCTAACTGACTCCTGGTTTGGTGCAGGTCAGCCACCGGATCTGTATGAGCATGTGTCCCAATCAACAATCATGACGATAACACAACATTGATAACAACAACCGTCATCATGATTGTTACAAAGATCCTCATCATCCCTGTCATAATCAAAACATTGACAGGAATTTTATCAGTGATGCAATGAACAATCAGACAGGGAAAATCAAGACATATGGGCTTTCAATCGTCTTAATCCATCTGGTCCACCGTCCCCAAACAACCATCTCCAGATTAGGGGGTCGACCGATTagtcggaatggccgatttaattagagacgatttcaagttttcataacaatcggaaattggtatttttgggcgctgatTTTTTTGcatctttatttaatctttatttaactaggcaagtcagttaagaaaacattcttattttcaatgacggcctaggaacggtgggttaactgcttcattcaggggcagaacgacagattttcaccatgtcagctcgggggatcc

Function

NR:

description
beta-1,4-galactosyltransferase galt-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152794 True 936 lncRNA 0.47 2 31998807 32045508

Neighbor

gene id symbol gene type direction distance location
LOC110534740 NA coding downstream 92677 31897466 ~ 31906130 (-)
LOC110534727 LOC106581127 coding downstream 105902 31889030 ~ 31892905 (-)
LOC100136303 LOC100136303 coding downstream 115746 31857694 ~ 31883061 (-)
LOC118939268 NA coding downstream 127580 31867097 ~ 31871227 (-)
LOC110487017 LOC106605347 coding downstream 221020 31765201 ~ 31777787 (-)
LOC110487099 NA coding upstream 23310 32068818 ~ 32075136 (-)
LOC110487106 LOC106605335 coding upstream 50023 32095531 ~ 32218170 (-)
lysmd1 LOC106605332 coding upstream 323114 32368622 ~ 32370951 (-)
LOC110487143 tmod4 coding upstream 329114 32374622 ~ 32387882 (-)
LOC110487180 mcl-1 coding upstream 382079 32427587 ~ 32429982 (-)
G132617 NA non-coding downstream 13435 31985139 ~ 31985372 (-)
G132615 NA non-coding downstream 15967 31982515 ~ 31982840 (-)
G132614 NA non-coding downstream 16719 31981870 ~ 31982088 (-)
G132613 NA non-coding downstream 17852 31980450 ~ 31980955 (-)
G132612 NA non-coding downstream 19715 31978592 ~ 31979092 (-)
G133048 NA non-coding upstream 261434 32306942 ~ 32307262 (-)
G133077 LOC106580947 non-coding upstream 292502 32338010 ~ 32338999 (-)
G133085 NA non-coding upstream 304714 32350222 ~ 32350448 (-)
G133063 NA non-coding upstream 321181 32366689 ~ 32367374 (-)
G133099 NA non-coding upstream 352722 32398230 ~ 32399418 (-)
LOC110486999 prdm1 other downstream 350012 31631886 ~ 31648795 (-)
G132197 NA other downstream 455798 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 799995 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 802515 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 1099243 30897026 ~ 30899564 (-)
LOC110514821 NA other upstream 693321 32738829 ~ 32756992 (-)
G134102 NA other upstream 702700 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 1167156 33208500 ~ 33225125 (-)
G134668 NA other upstream 1819980 33865488 ~ 33865937 (-)
G135575 NA other upstream 2558707 34604215 ~ 34604478 (-)

Expression


Co-expression Network