Gene
RNA
| Item | Value |
|---|---|
| gene id | G133077 |
| gene name | LOC106580947 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 32338010 ~ 32338999 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| soluble guanylate cyclase 88E-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153270 | True | 319 | lncRNA | 0.53 | 2 | 32338010 | 32338999 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487106 | LOC106605335 | coding | downstream | 119840 | 32095531 ~ 32218170 (-) |
| LOC110487099 | NA | coding | downstream | 262874 | 32068818 ~ 32075136 (-) |
| LOC110487053 | LOC106605337 | coding | downstream | 281772 | 32027226 ~ 32056238 (-) |
| LOC110534740 | NA | coding | downstream | 431880 | 31897466 ~ 31906130 (-) |
| LOC110534727 | LOC106581127 | coding | downstream | 445105 | 31889030 ~ 31892905 (-) |
| lysmd1 | LOC106605332 | coding | upstream | 29623 | 32368622 ~ 32370951 (-) |
| LOC110487143 | tmod4 | coding | upstream | 35623 | 32374622 ~ 32387882 (-) |
| LOC110487180 | mcl-1 | coding | upstream | 88588 | 32427587 ~ 32429982 (-) |
| ensab | ensa | coding | upstream | 93468 | 32430455 ~ 32441999 (-) |
| LOC110487241 | LOC106605328 | coding | upstream | 150605 | 32489604 ~ 32497994 (-) |
| G133048 | NA | non-coding | downstream | 30748 | 32306942 ~ 32307262 (-) |
| G132631 | NA | non-coding | downstream | 292502 | 31998807 ~ 32045508 (-) |
| G132617 | NA | non-coding | downstream | 352638 | 31985139 ~ 31985372 (-) |
| G132615 | NA | non-coding | downstream | 355170 | 31982515 ~ 31982840 (-) |
| G132614 | NA | non-coding | downstream | 355922 | 31981870 ~ 31982088 (-) |
| G133085 | NA | non-coding | upstream | 11223 | 32350222 ~ 32350448 (-) |
| G133063 | NA | non-coding | upstream | 27690 | 32366689 ~ 32367374 (-) |
| G133099 | NA | non-coding | upstream | 59231 | 32398230 ~ 32399418 (-) |
| G133100 | NA | non-coding | upstream | 66374 | 32405373 ~ 32406017 (-) |
| G133101 | NA | non-coding | upstream | 67910 | 32406909 ~ 32408081 (-) |
| LOC110486999 | prdm1 | other | downstream | 689215 | 31631886 ~ 31648795 (-) |
| G132197 | NA | other | downstream | 795001 | 31536047 ~ 31543009 (-) |
| LOC110486868 | LOC106605361 | other | downstream | 1139198 | 31196917 ~ 31199241 (-) |
| LOC110486852 | LOC106605360 | other | downstream | 1141718 | 31192419 ~ 31196292 (-) |
| trnae-cuc | LOC106605367 | other | downstream | 1438446 | 30897026 ~ 30899564 (-) |
| LOC110514821 | NA | other | upstream | 399830 | 32738829 ~ 32756992 (-) |
| G134102 | NA | other | upstream | 409209 | 32748208 ~ 32788121 (-) |
| LOC110487618 | LOC100380645 | other | upstream | 873665 | 33208500 ~ 33225125 (-) |
| G134668 | NA | other | upstream | 1526489 | 33865488 ~ 33865937 (-) |
| G135575 | NA | other | upstream | 2265216 | 34604215 ~ 34604478 (-) |
