G133063


Basic Information

Item Value
gene id G133063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32366689 ~ 32367374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153256
gctatttgaagaatctcaaatataaaatatattttgatttctttaaccaTTTTTTTGATTACTAaattatatgttatttcatagttttgatgtcttcactattattctacaatgtagaaaatagtaaaagtaaagaaaaacccttgaatgagtatgtagGTGTTcttatacactaccggtcaaaagttttagaagaCTTCTTATTAAACAATGAACTATTTCCAAGTTATTTCAAGATGTAGTACATTGATTACGTATTATATATTAGCCATGTCCAGAACAGCACTGTCTGGTTGTCCGTTTACTACACAAGACGAGAGTCAGAATGTCACACTTTGGAgttgtgtttgtatgttagtgTGATCTTGTAACTCTCCAAGTTATGTTTGGCCACAGACGCTAGATCATGTCAGTTATGCTACCTCGTAGTGTCTTATGCAATGTCAGAAATGTGAAAAATATGCAAGTCTTGGAGAACAAtagaaacaaatatatatatttattattgaaACCAATGTGAGTTGGTATAGCCTAGTCTTCATTGGGTGTTTGTTACAATTACGCAATGGTGTACATATTTATTTTTAGAAGAATACTGAGCATTGCACTTTCTTTTTCTAATCTTGGCACTAGGCTGTAGGCAGTGGTAAGGttgtatgtattgtattgttaACACTGAATTAGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU153256 True 686 lncRNA 0.32 1 32366689 32367374

Neighbor

gene id symbol gene type direction distance location
LOC110487106 LOC106605335 coding downstream 148519 32095531 ~ 32218170 (-)
LOC110487099 NA coding downstream 291553 32068818 ~ 32075136 (-)
LOC110487053 LOC106605337 coding downstream 310451 32027226 ~ 32056238 (-)
LOC110534740 NA coding downstream 460559 31897466 ~ 31906130 (-)
LOC110534727 LOC106581127 coding downstream 473784 31889030 ~ 31892905 (-)
lysmd1 LOC106605332 coding upstream 1248 32368622 ~ 32370951 (-)
LOC110487143 tmod4 coding upstream 7248 32374622 ~ 32387882 (-)
LOC110487180 mcl-1 coding upstream 60213 32427587 ~ 32429982 (-)
ensab ensa coding upstream 65093 32430455 ~ 32441999 (-)
LOC110487241 LOC106605328 coding upstream 122230 32489604 ~ 32497994 (-)
G133085 NA non-coding downstream 16241 32350222 ~ 32350448 (-)
G133077 LOC106580947 non-coding downstream 27690 32338010 ~ 32338999 (-)
G133048 NA non-coding downstream 59427 32306942 ~ 32307262 (-)
G132631 NA non-coding downstream 321181 31998807 ~ 32045508 (-)
G132617 NA non-coding downstream 381317 31985139 ~ 31985372 (-)
G133099 NA non-coding upstream 30856 32398230 ~ 32399418 (-)
G133100 NA non-coding upstream 37999 32405373 ~ 32406017 (-)
G133101 NA non-coding upstream 39535 32406909 ~ 32408081 (-)
G133105 NA non-coding upstream 45625 32412999 ~ 32413340 (-)
G133061 NA non-coding upstream 56862 32424236 ~ 32425339 (-)
LOC110486999 prdm1 other downstream 717894 31631886 ~ 31648795 (-)
G132197 NA other downstream 823680 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 1167877 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 1170397 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 1467125 30897026 ~ 30899564 (-)
LOC110514821 NA other upstream 371455 32738829 ~ 32756992 (-)
G134102 NA other upstream 380834 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 845290 33208500 ~ 33225125 (-)
G134668 NA other upstream 1498114 33865488 ~ 33865937 (-)
G135575 NA other upstream 2236841 34604215 ~ 34604478 (-)

Expression


Co-expression Network