G133101


Basic Information

Item Value
gene id G133101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32406909 ~ 32408081 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153297
ATTAACctaaacatgtttagcatctcttggcttccacgcatagcctacacTGATGCACACCTTTTGGAACATCTGtgtttaaaaagtctaataaatccatGTAATAaagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccttgtaatatagcctacaccgtcacaataagtcCCTGTAATATAGCCCACACCGTCACAATAATCCATGTAATTtagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctccacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctccacCGTCACAAtaagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcccacACCGTCACAATAAGTCCATGTAATTtagcctacaccgtcacaataagtccatgtaatatagcctacacaccgtcacaataagtccatgtaatatagcctccacCGTCACAAtaagtccatgtaatatagcctacaccgtcacaataagtacatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctccacaccgtcacaataagtccatgtaatatagcctccacCGTCACAAtaagtccatgtaatatagcctacacactGTCACAAtaagtccatgtaatatagcctacacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcctacaccgtcacaataagtccatgtaatatagcccacACCGTCACAATAAGTCCATGTAATTtagcctacaccgtcacaataagtccatgtaata

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153297 True 1140 lncRNA 0.37 2 32406909 32408081

Neighbor

gene id symbol gene type direction distance location
LOC110487143 tmod4 coding downstream 19027 32374622 ~ 32387882 (-)
lysmd1 LOC106605332 coding downstream 35958 32368622 ~ 32370951 (-)
LOC110487106 LOC106605335 coding downstream 188739 32095531 ~ 32218170 (-)
LOC110487099 NA coding downstream 331773 32068818 ~ 32075136 (-)
LOC110487053 LOC106605337 coding downstream 350671 32027226 ~ 32056238 (-)
LOC110487180 mcl-1 coding upstream 19506 32427587 ~ 32429982 (-)
ensab ensa coding upstream 24386 32430455 ~ 32441999 (-)
LOC110487241 LOC106605328 coding upstream 81523 32489604 ~ 32497994 (-)
ctsk catk coding upstream 90722 32498803 ~ 32505857 (-)
rrnad1 cl026 coding upstream 184582 32592663 ~ 32597152 (-)
G133100 NA non-coding downstream 892 32405373 ~ 32406017 (-)
G133099 NA non-coding downstream 7491 32398230 ~ 32399418 (-)
G133063 NA non-coding downstream 39535 32366689 ~ 32367374 (-)
G133085 NA non-coding downstream 56461 32350222 ~ 32350448 (-)
G133077 LOC106580947 non-coding downstream 67910 32338010 ~ 32338999 (-)
G133105 NA non-coding upstream 4918 32412999 ~ 32413340 (-)
G133061 NA non-coding upstream 16155 32424236 ~ 32425339 (-)
G133113 NA non-coding upstream 44560 32452641 ~ 32452849 (-)
G133114 NA non-coding upstream 45638 32453719 ~ 32453947 (-)
LOC110486999 prdm1 other downstream 758114 31631886 ~ 31648795 (-)
G132197 NA other downstream 863900 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 1208097 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 1210617 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 1507345 30897026 ~ 30899564 (-)
LOC110514821 NA other upstream 330748 32738829 ~ 32756992 (-)
G134102 NA other upstream 340127 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 804583 33208500 ~ 33225125 (-)
G134668 NA other upstream 1457407 33865488 ~ 33865937 (-)
G135575 NA other upstream 2196134 34604215 ~ 34604478 (-)

Expression


Co-expression Network