G132960


Basic Information

Item Value
gene id G132960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32408998 ~ 32409254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153151
CATTGATCCCTGTGCTAAAGAAGAGATGTCCCAACACTTGATCATTCAGACTGAGTCACATCCTGTGACACATACAGACATATGACCCTGTTCCTGCTGAATGGAACATGCGGTACATGACGTATCAttaatggtggaaaaagtaccaaattgtcatatttgagtaatggtggaaaaagtaccaaattgtcatatttgagtaaaagtaaaatataccttaatataaaaggactcaagtaaaagtaaaagtcacccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153151 True 257 lncRNA 0.37 1 32408998 32409254

Neighbor

gene id symbol gene type direction distance location
scnm1 scnm1 coding upstream 35125 32370802 ~ 32373873 (+)
tnfaip8l2b LOC106605333 coding upstream 43651 32356928 ~ 32365347 (+)
LOC110487115 LOC106580947 coding upstream 60030 32332091 ~ 32348968 (+)
LOC110487062 LOC106605340 coding upstream 345612 32056519 ~ 32063386 (+)
LOC110534747 LOC106605338 coding upstream 381899 31987684 ~ 32027099 (+)
hormad1 hormad1 coding downstream 32992 32442246 ~ 32455246 (+)
onecutl LOC106605329 coding downstream 68396 32477650 ~ 32489444 (+)
lingo4b LOC106605327 coding downstream 116478 32525732 ~ 32543737 (+)
si:ch211-113g11.6 LOC106605326 coding downstream 141653 32550907 ~ 32568058 (+)
tlr18 LOC106580799 coding downstream 160186 32569440 ~ 32582549 (+)
G132959 NA non-coding upstream 62 32408523 ~ 32408936 (+)
G132957 NA non-coding upstream 5839 32402827 ~ 32403159 (+)
G132956 NA non-coding upstream 6383 32402342 ~ 32402615 (+)
G132907 tmod4 non-coding upstream 31596 32374648 ~ 32377402 (+)
G132926 NA non-coding upstream 81951 32326687 ~ 32327047 (+)
G132961 NA non-coding downstream 164 32409418 ~ 32409658 (+)
G132962 NA non-coding downstream 1759 32411013 ~ 32411281 (+)
G132964 NA non-coding downstream 2981 32412235 ~ 32412484 (+)
G132966 NA non-coding downstream 7390 32416644 ~ 32416880 (+)
G132973 NA non-coding downstream 46012 32455266 ~ 32455481 (+)
G132342 LOC100136303 other upstream 521426 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1042676 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1115964 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 1659044 30748055 ~ 30749954 (+)
G131491 NA other upstream 1708375 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 758184 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1087200 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1404779 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 1553163 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 2278701 34687955 ~ 34692286 (+)

Expression


Co-expression Network