G132966


Basic Information

Item Value
gene id G132966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32416644 ~ 32416880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153157
GGTATGTTATGAGTTGGAATTCTTGGGAACATGTTACACCCCTACTGTAGGGAATATTTGTCTCTGGACTGCACTGTTGTCCTCTCACAGAGGGTGGGAAAACAGGCCCTATCTGGAATGGCCCACTATGCCCTCACATCTGAGGTTACTGCCCTCCCTGAGACTACAATGTACTGAGAAAAGGGACAGTTAAAATGTATCTCTTGTGCCAATAAGTTTGAAAAAGTAaacttatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153157 True 237 lncRNA 0.42 1 32416644 32416880

Neighbor

gene id symbol gene type direction distance location
scnm1 scnm1 coding upstream 42771 32370802 ~ 32373873 (+)
tnfaip8l2b LOC106605333 coding upstream 51297 32356928 ~ 32365347 (+)
LOC110487115 LOC106580947 coding upstream 67676 32332091 ~ 32348968 (+)
LOC110487062 LOC106605340 coding upstream 353258 32056519 ~ 32063386 (+)
LOC110534747 LOC106605338 coding upstream 389545 31987684 ~ 32027099 (+)
hormad1 hormad1 coding downstream 25366 32442246 ~ 32455246 (+)
onecutl LOC106605329 coding downstream 60770 32477650 ~ 32489444 (+)
lingo4b LOC106605327 coding downstream 108852 32525732 ~ 32543737 (+)
si:ch211-113g11.6 LOC106605326 coding downstream 134027 32550907 ~ 32568058 (+)
tlr18 LOC106580799 coding downstream 152560 32569440 ~ 32582549 (+)
G132964 NA non-coding upstream 4160 32412235 ~ 32412484 (+)
G132962 NA non-coding upstream 5363 32411013 ~ 32411281 (+)
G132961 NA non-coding upstream 6986 32409418 ~ 32409658 (+)
G132960 NA non-coding upstream 7390 32408998 ~ 32409254 (+)
G132959 NA non-coding upstream 7708 32408523 ~ 32408936 (+)
G132973 NA non-coding downstream 38386 32455266 ~ 32455481 (+)
G133137 NA non-coding downstream 63024 32479904 ~ 32480174 (+)
G133125 NA non-coding downstream 72773 32489653 ~ 32492175 (+)
G133154 NA non-coding downstream 94945 32511825 ~ 32512395 (+)
G132342 LOC100136303 other upstream 529072 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1050322 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1123610 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 1666690 30748055 ~ 30749954 (+)
G131491 NA other upstream 1716021 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 750558 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1079574 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1397153 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 1545537 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 2271075 34687955 ~ 34692286 (+)

Expression


Co-expression Network