Gene
RNA
| Item | Value |
|---|---|
| gene id | G133115 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 32454640 ~ 32455116 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| HORMA domain-containing protein 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153311 | True | 477 | lncRNA | 0.39 | 1 | 32454640 | 32455116 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ensab | ensa | coding | downstream | 12641 | 32430455 ~ 32441999 (-) |
| LOC110487180 | mcl-1 | coding | downstream | 24658 | 32427587 ~ 32429982 (-) |
| LOC110487143 | tmod4 | coding | downstream | 66758 | 32374622 ~ 32387882 (-) |
| lysmd1 | LOC106605332 | coding | downstream | 83689 | 32368622 ~ 32370951 (-) |
| LOC110487106 | LOC106605335 | coding | downstream | 236470 | 32095531 ~ 32218170 (-) |
| LOC110487241 | LOC106605328 | coding | upstream | 34488 | 32489604 ~ 32497994 (-) |
| ctsk | catk | coding | upstream | 43687 | 32498803 ~ 32505857 (-) |
| rrnad1 | cl026 | coding | upstream | 137547 | 32592663 ~ 32597152 (-) |
| LOC110487305 | LOC106605321 | coding | upstream | 177863 | 32632979 ~ 32640545 (-) |
| LOC110514821 | NA | coding | upstream | 285637 | 32738829 ~ 32756992 (-) |
| G133114 | NA | non-coding | downstream | 693 | 32453719 ~ 32453947 (-) |
| G133113 | NA | non-coding | downstream | 1791 | 32452641 ~ 32452849 (-) |
| G133061 | NA | non-coding | downstream | 29301 | 32424236 ~ 32425339 (-) |
| G133105 | NA | non-coding | downstream | 41300 | 32412999 ~ 32413340 (-) |
| G133118 | NA | non-coding | upstream | 4030 | 32459146 ~ 32459377 (-) |
| G133960 | LOC106562530 | non-coding | upstream | 54015 | 32509131 ~ 32509373 (-) |
| G133962 | LOC100380853 | non-coding | upstream | 55039 | 32510155 ~ 32510540 (-) |
| G133990 | NA | non-coding | upstream | 90659 | 32545775 ~ 32546003 (-) |
| G133992 | NA | non-coding | upstream | 92373 | 32547489 ~ 32547707 (-) |
| LOC110486999 | prdm1 | other | downstream | 805845 | 31631886 ~ 31648795 (-) |
| G132197 | NA | other | downstream | 911631 | 31536047 ~ 31543009 (-) |
| LOC110486868 | LOC106605361 | other | downstream | 1255828 | 31196917 ~ 31199241 (-) |
| LOC110486852 | LOC106605360 | other | downstream | 1258348 | 31192419 ~ 31196292 (-) |
| trnae-cuc | LOC106605367 | other | downstream | 1555076 | 30897026 ~ 30899564 (-) |
| G134102 | NA | other | upstream | 293092 | 32748208 ~ 32788121 (-) |
| LOC110487618 | LOC100380645 | other | upstream | 757548 | 33208500 ~ 33225125 (-) |
| G134668 | NA | other | upstream | 1410372 | 33865488 ~ 33865937 (-) |
| G135575 | NA | other | upstream | 2149099 | 34604215 ~ 34604478 (-) |
