G133125


Basic Information

Item Value
gene id G133125
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32489653 ~ 32492175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153322
CAAGTAAGTAGCTTTGCACGAGCCTTGGCATGTGCGAGCTAAAACGGCTCATACGAGCAAGAGCCTagctcctgtttctgtagtgtgaggcaacTTGATGTACTAGTACACCCGCTGGACAGGACGCTAGATACAGTGATAATGTAGATAATCACAATTGCCTTATACATGACATCTAAAAACTATTTTAAAGAAGTACTGTCTATATAGACAGAAAGTGACAGAAAGTGAcagaaagtgatgggttagaagaagcctacataaccaacccatagagtaaaatgtaacatccatatatggccagctatgtaaactttaacattgatttatcctgcaatagatgtggttcaattggtaacatacattttagTCTTTTAAgaggaaagtaatctaaaagtaactgaatgtaatcagattacattactcagtttgggtaatccaaaagttatgcTACtggttactgattacaattttgcaCAGGTAACTAATAACTgttatggattacatttagaaagtaacctacccaacacTGCCAattagctagaaaggtaactCTAAACACATTTCCGCTAAGAGCAGCTATTTAGCTgttaaacaaaggttagccaGCCATGTATGTCCAAATCAAGAAAGTTTACCAGCAGCTAGCTGACTAAACTCAACTCCATCGTGAAGGAAGTTTCTGATAAACTCCACCAACGGAGTTGAGCAGAGACCAGGCTTTGTGAAATT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU153322 True 732 lncRNA 0.35 2 32489653 32492175
Loading

Neighbor

gene id symbol gene type direction distance location
onecutl LOC106605329 coding upstream 209 32477650 ~ 32489444 (+)
hormad1 hormad1 coding upstream 34407 32442246 ~ 32455246 (+)
scnm1 scnm1 coding upstream 115780 32370802 ~ 32373873 (+)
tnfaip8l2b LOC106605333 coding upstream 124306 32356928 ~ 32365347 (+)
LOC110487115 LOC106580947 coding upstream 140685 32332091 ~ 32348968 (+)
lingo4b LOC106605327 coding downstream 33557 32525732 ~ 32543737 (+)
si:ch211-113g11.6 LOC106605326 coding downstream 58732 32550907 ~ 32568058 (+)
tlr18 LOC106580799 coding downstream 77265 32569440 ~ 32582549 (+)
LOC110487342 LOC106605324 coding downstream 97014 32589189 ~ 32592242 (+)
isg20l2 isg20l2 coding downstream 104926 32597101 ~ 32605620 (+)
G133137 NA non-coding upstream 9479 32479904 ~ 32480174 (+)
G132973 NA non-coding upstream 34172 32455266 ~ 32455481 (+)
G132966 NA non-coding upstream 72773 32416644 ~ 32416880 (+)
G132964 NA non-coding upstream 77169 32412235 ~ 32412484 (+)
G133154 NA non-coding downstream 19650 32511825 ~ 32512395 (+)
G133157 NA non-coding downstream 22833 32515008 ~ 32515207 (+)
G133163 NA non-coding downstream 28635 32520810 ~ 32521095 (+)
G133185 NA non-coding downstream 53603 32545778 ~ 32545991 (+)
G132342 LOC100136303 other upstream 602081 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1123331 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1196619 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 1739699 30748055 ~ 30749954 (+)
G131491 NA other upstream 1789030 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 675263 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1004279 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1321858 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 1470242 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 2195780 34687955 ~ 34692286 (+)

Expression

G133125 Expression in all Baseline Samples

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G133125 Expression in each Bioproject

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G133125 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network