Gene
RNA
| Item | Value |
|---|---|
| gene id | G133960 |
| gene name | LOC106562530 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 32509131 ~ 32509373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106562530 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154254 | True | 243 | lncRNA | 0.60 | 1 | 32509131 | 32509373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ctsk | catk | coding | downstream | 3274 | 32498803 ~ 32505857 (-) |
| LOC110487241 | LOC106605328 | coding | downstream | 11137 | 32489604 ~ 32497994 (-) |
| ensab | ensa | coding | downstream | 67132 | 32430455 ~ 32441999 (-) |
| LOC110487180 | mcl-1 | coding | downstream | 79149 | 32427587 ~ 32429982 (-) |
| LOC110487143 | tmod4 | coding | downstream | 121249 | 32374622 ~ 32387882 (-) |
| rrnad1 | cl026 | coding | upstream | 83290 | 32592663 ~ 32597152 (-) |
| LOC110487305 | LOC106605321 | coding | upstream | 123606 | 32632979 ~ 32640545 (-) |
| LOC110514821 | NA | coding | upstream | 231380 | 32738829 ~ 32756992 (-) |
| LOC110487362 | NA | coding | upstream | 261037 | 32770410 ~ 32775521 (-) |
| LOC110487370 | nes | coding | upstream | 346392 | 32855765 ~ 32868211 (-) |
| G133118 | NA | non-coding | downstream | 49754 | 32459146 ~ 32459377 (-) |
| G133115 | NA | non-coding | downstream | 54015 | 32454640 ~ 32455116 (-) |
| G133114 | NA | non-coding | downstream | 55184 | 32453719 ~ 32453947 (-) |
| G133113 | NA | non-coding | downstream | 56282 | 32452641 ~ 32452849 (-) |
| G133962 | LOC100380853 | non-coding | upstream | 782 | 32510155 ~ 32510540 (-) |
| G133990 | NA | non-coding | upstream | 36402 | 32545775 ~ 32546003 (-) |
| G133992 | NA | non-coding | upstream | 38116 | 32547489 ~ 32547707 (-) |
| G134027 | NA | non-coding | upstream | 173237 | 32682610 ~ 32684723 (-) |
| LOC110486999 | prdm1 | other | downstream | 860336 | 31631886 ~ 31648795 (-) |
| G132197 | NA | other | downstream | 966122 | 31536047 ~ 31543009 (-) |
| LOC110486868 | LOC106605361 | other | downstream | 1310319 | 31196917 ~ 31199241 (-) |
| LOC110486852 | LOC106605360 | other | downstream | 1312839 | 31192419 ~ 31196292 (-) |
| trnae-cuc | LOC106605367 | other | downstream | 1609567 | 30897026 ~ 30899564 (-) |
| G134102 | NA | other | upstream | 238835 | 32748208 ~ 32788121 (-) |
| LOC110487618 | LOC100380645 | other | upstream | 703291 | 33208500 ~ 33225125 (-) |
| G134668 | NA | other | upstream | 1356115 | 33865488 ~ 33865937 (-) |
| G135575 | NA | other | upstream | 2094842 | 34604215 ~ 34604478 (-) |
