G133185


Basic Information

Item Value
gene id G133185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32545778 ~ 32545991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153399
tcatatgtacagtggggaaaacaagtatttgatacactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtaatttttatgataggtacacttaaactgtgagagatggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattcattagcattttattgcatgacataagtatttggtcacctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153399 True 214 lncRNA 0.43 1 32545778 32545991

Neighbor

gene id symbol gene type direction distance location
lingo4b LOC106605327 coding upstream 2041 32525732 ~ 32543737 (+)
onecutl LOC106605329 coding upstream 56334 32477650 ~ 32489444 (+)
hormad1 hormad1 coding upstream 90532 32442246 ~ 32455246 (+)
scnm1 scnm1 coding upstream 171905 32370802 ~ 32373873 (+)
tnfaip8l2b LOC106605333 coding upstream 180431 32356928 ~ 32365347 (+)
si:ch211-113g11.6 LOC106605326 coding downstream 4916 32550907 ~ 32568058 (+)
tlr18 LOC106580799 coding downstream 23449 32569440 ~ 32582549 (+)
LOC110487342 LOC106605324 coding downstream 43198 32589189 ~ 32592242 (+)
isg20l2 isg20l2 coding downstream 51110 32597101 ~ 32605620 (+)
LOC110534753 LOC106605320 coding downstream 62271 32608262 ~ 32632855 (+)
G133163 NA non-coding upstream 24683 32520810 ~ 32521095 (+)
G133157 NA non-coding upstream 30571 32515008 ~ 32515207 (+)
G133154 NA non-coding upstream 33383 32511825 ~ 32512395 (+)
G133125 NA non-coding upstream 53603 32489653 ~ 32492175 (+)
G133324 NA non-coding downstream 298260 32844251 ~ 32844534 (+)
G133374 NA non-coding downstream 435191 32981182 ~ 32982028 (+)
LOC110487479 LOC106605309 non-coding downstream 449629 32988834 ~ 33002008 (+)
G133272 NA non-coding downstream 465071 33011062 ~ 33012909 (+)
G132342 LOC100136303 other upstream 658206 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1179456 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1252744 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 1795824 30748055 ~ 30749954 (+)
G131491 NA other upstream 1845155 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 621447 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 950463 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1268042 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 1416426 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 2141964 34687955 ~ 34692286 (+)

Expression


Co-expression Network