G133324


Basic Information

Item Value
gene id G133324
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32844251 ~ 32844534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153548
CTGATGAATTCAGGAGAGAAAGGGTCTGAGTTGAGGAGGTTTAAGGGGTTTTGGAGAAATGCTTCCTGTTTAGggaacatgtctgtctgtctctgtctgtccttgcATTAAGGACATGTCCTTTTGCATTGGAgaaatggtacacacacacacacacacacacacacacaactcgCTACCTCAGTATGTTGCTATCTGTCTATCACttaactcactctctgtctgtctcttcctttcaatattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153548 True 244 lncRNA 0.43 2 32844251 32844534

Neighbor

gene id symbol gene type direction distance location
rhbg2a rhbg2a coding upstream 159527 32673648 ~ 32684724 (+)
LOC110534753 LOC106605320 coding upstream 211396 32608262 ~ 32632855 (+)
isg20l2 isg20l2 coding upstream 238631 32597101 ~ 32605620 (+)
LOC110487342 LOC106605324 coding upstream 252009 32589189 ~ 32592242 (+)
tlr18 LOC106580799 coding upstream 261702 32569440 ~ 32582549 (+)
LOC110487428 NA coding downstream 28654 32873188 ~ 32875850 (+)
LOC110487411 LOC106605313 coding downstream 33367 32877901 ~ 32882058 (+)
LOC110487447 LOC106605310 coding downstream 51881 32896415 ~ 32939810 (+)
LOC110487479 LOC106605309 coding downstream 144300 32988834 ~ 33002008 (+)
LOC110487536 NA coding downstream 184339 33028873 ~ 33045721 (+)
G133185 NA non-coding upstream 298260 32545778 ~ 32545991 (+)
G133163 NA non-coding upstream 323156 32520810 ~ 32521095 (+)
G133157 NA non-coding upstream 329044 32515008 ~ 32515207 (+)
G133154 NA non-coding upstream 331856 32511825 ~ 32512395 (+)
G133374 NA non-coding downstream 136648 32981182 ~ 32982028 (+)
G133272 NA non-coding downstream 166528 33011062 ~ 33012909 (+)
G133415 NA non-coding downstream 237153 33081687 ~ 33081982 (+)
G133417 NA non-coding downstream 238814 33083348 ~ 33083575 (+)
G132342 LOC100136303 other upstream 956679 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1477929 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1551217 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 2094297 30748055 ~ 30749954 (+)
G131491 NA other upstream 2143628 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 322904 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 651920 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 969499 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 1117883 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1843421 34687955 ~ 34692286 (+)

Expression


Co-expression Network