G134229


Basic Information

Item Value
gene id G134229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32994377 ~ 33001917 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU154584
CGCAGATACAATAATAAAATATCAAATTATTCACAAAAACATGTGCTAAGAAATAAACCTGCAATATCACATGCCTCTTGCGGGCATGACACACTGTAACAGTTCAAAGAAGACTTTATTTTATCAAAGTGACGGCCAGCCACATGGCAAACCCTCTCTCACTGATCACAGAGAAACCAGAAACTAAAGCCAGGAGATGCTGACCCAAAACTAATGCACTAAGACCACTATAAGACCGGTATGAAACACTTCTACGGTGCCGGGAGAATCTGAAGAAACACTACCAAAGACTGTCAGACTGCGGTGGCCCCTTCAGAAGAGGACGACGTGAAGGTCATTTCAGTCCCCCTGCTTCAGTCAGTTGTGGCGGAAAATACCGTCCTGACATGTTGAATTGTACGACAAATATTCACTTTTAACTACCTAGTTTTgagattaaataaatacatttttaggtTCATCCATATGTGAAGGAATGACAATCAAGCTTTCCTTCCCTCTTTATAGAACTGGGATGAGAAAATGAAAAGGGTCAAATACTGACCGTGTCACATGGGGACAGAAACGGCCTCTCTTTGCTTCACCTGAAACACTTGTCCTTTTCTGTTTTCTGAAGGGGCGCCAACTATGAAAATCTACAAGGAACAACCAGCCCCAGACCCCTTGTGTTAAAACCAAACACAAAGGATCTGTGGTGTTTATCCAGTCTAGGTGACCATACAAGATACATGCAAACTAGTACGGATatgaatgtgttggtgtgtgtgtgtgtggctggttaCCATAGATCTACTACACAGTGTGCCTATGTGCTAAACTATTGATCACTCAGCTCAGTTCTCAGCCTGTCATGTTTTCAAGAAGAAACTTGAGCCCAATTTTCAGGTAATCATTCATTAAGGCTTTGATGATGTCCTCTCTTGCCTTACCAATCACAAAGGGTCCCAAGTAGTAGACATATGAATGTGTTTATCTGAATGTGTTTAACATGTGCCCCTGTGGGACACCTGAATCACTCGTTCTCAGCATTGCAATCACAACTGAAGCTGTGTTAGCATAAAAAGTTAGAGATTAATAAAAGCAAGTTAAGACTCCAGAGGAAATGTGTAATGGGGCCAGTCAGTATGGGGTTAGTCAAAGGGGAAAATGTAAGCAAGCAGCATAGAGAGAGTGCTGATGCAAGAAATACATGTGTAATTGAGGCACAATATTGATGCTCAGTGACTAAAATACCTCCAAATCCTaaaaatattatattattttctGTCATAATTCCACTGTGAATGCACGGGTGTTCTTTTAAATAGTGCATATCGGAAGTTAAAATATAAGCTATGGGGAACACACATCAGCTTATATTTCATTTACAATGAAATACAGTGTGGAGGTGAGTCCATAACTTTCATAAATAAaacgtattttattttttttaaccgtTAGTAGAAACCAACTTTCCTGTGTTTAGAAATATATTAACTTCTTgtatttttaattaaaaaaacacatttcttgaGGTTACTCATAAATATGTTTTCTTCATTTTAAGATTTTCATAAATAACATCCTGAAACTGACTTAATCCTCGTCTTTCTATGAAATAATAACCCATGTTAGCAAAATAGATTTAAGAAACTGTAATAATATTCATTTTTAAAGTTGCTTTCTATAAATGTATTTGGAAGAACTCTATAGACTGCGGTGAAACCTTCTCACAAATTCTTTCCAgctcactttaaaatgtataaaCCAAAAGGTAAAAAGAGTGCAATGGTAATTTATTTTACATTCAAATGCATTACTTGCTCATCTTGTGATTATGATAGGTCAGAATAATTGCTTAAGTGCGTCAATTTAAAGGATTTCCTATCACTCCTTGAAAGGGGTGCTATTATTGTTATACATAATGCATAAAGAGTTGTACATTTGTTAAAGAGAAGAAAACTGTTCATAGTTTCTACGGTTACTTTAATATATTATAAAGAACACTAACAATTGAAAAAAAAGTTAATGAAATAGACATCCCCCTAAGAGTTCTCACCGCCATCTTTGTTTCTCCACTAAAGGAAGTGGAGTACTTCATATACTGGGTGACTGGGTGCATATATCAAGCTATACCTCATCTTATAAGACAGTCATTATTTGAATTTCTATATCAATTACACCTCAAGGTAAATATATGGAATTAAATATGTCCATCTTAATTTCTTTAAAGCTTTTTATACACCTTGTGGTTATGTTGATGAAATATGTTAATGCCATGGGATCTTAATTTTACTCTTATGTACTGGACTAAACTTCAGCTATCATACTTCGACATGGAGTATAAAGTTAACTAGAAACAATATTAAATTAAAACCGCAGTATTATTTTTGAACTCTAACAAAGGTACTGCAGGGTATTTGTGTAATCTTAACAACTTTCTTATGCATCATTAAACTATTGTTCAGTCTGGGGTCTTTGAGACAAATCTAGCCCTTCAGCTGAAATTCAACATGAATTTGAACAGAATTGTAAACAAAGACAAATTTCTAACCCTTATTTTTCTCATTTATTATGTGTCCCTGCCCCATTCTGAAGAAACATAAACTTCCTAAGACAAGTCTAGCGTTTTCATATTAAGAGCTGTGATGAAACAACTTATAGACATCATTATTCATAAATCTACGTTGGCAATAATACCAATATAAATACAACTTAAGAGGGTGACGCATTAGGACTGGTGTCTTTGGGCAGTGATTGGATAGTTGATCACTGAAGCTACTGTAGCATAAAAAAAGACCAAACTGAAACAGGATGTCTTTATTGAGACAAGCTCCATTTCACAGATATTGACTGAAGCTTGTATGCTGTATGACTTTGGACAAAACTATCACTAGCGGGTTATTAAAAACAAAAGCTGATTATTATTGTATTGACCTCAGACACCTTCATCAATAAATCCAAACTATGATAAGGTCGAAATGTGTTAACATTCGTAGAATTGTAAGCTTACGATTAGCAATATAATTTCTATAGATGTCCTCGAACCTCTTCCAAGGTTTTGTTCTTTGGCTACCTTTTGACCTTTTATTTTAAATCAGCTAAATGCTGGATAATGACTACTTATAACAGATAGCATAAAGAAATAATTAAATTGTGCCATCAAATCAGCTACATATGTTTTGGAACCAAtctaaaaactgaaatatattcTCATGATATGCTTATGGTAACTATAAACGTTTCTCCCTAAACATGAATAAATACAGAGTAATACATGTTAAATAAATGCTACTTTCCCAAGTGATGAAAATGATTGGCTCAATGCATTGGGCATCAGTATACGTTCATATGGAAGAGGTCTTAGATAGATCCTATGGAAATAATCCAACCTTCTGTCTTGCCATTGTGTCTACTTTAGTTTGTGATTTAAGTTATGACTTCCTGCTTTCGACAGACAGGAAATGCCTCAATTGTTCATGTTATGTTCCTGAAAAGCATTGTATGTTTACACTGAAAGCTTACTTATACAATGCAATTGGTTTCTTCCAAATAATAGGTATTGTGATCTCAAAATTCCACAGATACTAAGAGGAGGAACTCTTGAGGTTGCACTGGTGTTGGCACACCCTGTATTTGAGGTATACTTGCAGTCTTATTAATATTCAATGTTAAAAAGACGGGATTAAGCAGTCAAAAATTACTAAAAGCAAGACGTAGGAAAGCAACAAAAACATGCTATTGTGCCTGAAACTGTTACTAATTAATTACATTTCTCATCCTACATTGGCATAAATCCATATGCATTTTTAGAAGATATTAACCAAAAATTGAATAATATTCAAATGAATCAAGTTTGCGTTATGGATGGTGCTGAATTCTATGAATTTACTAAACTGGCTCTTTTGTTTACTGTTGCAGTATTGACATTATTGCTTTTCATCCTAATGTACATAAAACCTGATTCATCCAAAAGGACCTAGGAATATTTTAGAACACGTCTTCACATATTTGAGAGAATGTATTGGTATATGTCAGTGGAAACATCAATACAGCCCTGTATTCATCATTACAGTATGTGGTATTGTGGTATTCTTATCTATATATTTGACTTGATGAAATGCTTAAGTTTATTAGATCCATACATATAAGTAGCCTATCAATATACTTTATGTTTAAGGATGAGgggacattatatatatatatatataaatcaaaGTGATCTTAAAAGTCCATAAACAAACAAATTCAAAATGATATTTTCACCTTGTAAAAATAATCAAAATCCCACTTATATAGCAGGCATTTGACTGGATGTAAattactgatatatatatatacacagatgCGCAGAATCCTTTCTCATAAAGCACAATGCAAATTTCTCCCACAGCCTCTAAAACAGTGAGACTCTCTAAAAAGCCCTCTACATTAAACCAGTGCAAACTCAACCAAGTCATCAgtactgactgaatggatgagaGGTTTCCcataataccactactacaagGAATAACAATAATTATATTATAAAAACATGATAGGGAAACCTTATGTGCATGTCTTTCAAAATCTATGAAGAAATATTCACCATCAGTGGTCGGTTTGGTATTAATTATATGTGTTTTCTCATAATAAGGTGCTTTACTCTATATTTTAATGTAAAGGGTTTAAGAGCCTAATTTCCCAATTCCATTTAACCCCACCCAACCCGGTTGATTCACATTCTTTTCTGACAAATAGTTACGTGAACGTTTTTTTAAGGGGCAATACTATTGAAGGCCTACTGTATGTCACTAAACTTTCATGCCAAAGTGAAAGCAATATTTATCTTTTAATACAAAATATTCaggcttaaaacaaaataaaaaagaaTAGAAAATACTATATTCAGTTAACAGCGTTATACTGCCTTGAAATTGTCATTGACAGTTCAGACCAAACCACTGTGCAGTTCTCCCCATTAATAAATAGTCAATTAATTTCTAAATATGTAATAGAATTTAGATACTCTGAAAGTACAGTTCTATTTCTTCACAGTCCATGGACAACAGGAGTGGTCTGCTGACAATACAATGGGGGAAAGGGGGGCTCTGTTGCTGCCTAGACTAGGGACAACAGTCTATTGTAACTATTCATTATATTTTGATGGACAAAAGTTGAGCAAAAGAGTTCTCCTGAAAAAACAACTTAATAGAGCGATCTGATGCAGTGTTAGTGGGAGACCAGCTGAATCACCAGCATGTCCTTGTTCACCTGCCACCACCAGCAAACATGAGGCAGCAGCCTTCTAACTACCCCTCTCACAAAGACTAGATCTGCAGGTTCTCTTTTCTTTGAGagcagccttctctctctctccaccccaaaAAGCCCCCCTCTTATCCTCCAACGGCTCtaatcccccctccctccctctgaaaTCCCCAGGCTGGGGCTAAGGCAGAGGCAAAGGGTGTGTAATTTGATTCAGCATGAGTGGTGGCTAAATGGGGCGTTTCCTCCGCTTTCCTGTCAATTACAATTGTCTGATTTCATTCTGAAGGCCCAGTGCTAGCCTGCCATTGGCTaagcctgtgtgtctgtggtgagTGGGCAGCTGCAGGATGTCCCATACAGACAGgagataaaggggggggggggggggctctctaTGGAAACTTCGATCTGCACTCGCTCTCTGTCACAAAGGCCTCCATCCAAATTGGGGGGACGATGAACTCCAAGTGATCAGACTCCTCATACTCTTAAATGATATATGTCTGCATGTGTTCATACCCTTATCTTATTGAGAACACATGGAGACATCTAGTTCAGTGGGGCATTTCAAAGAATTGGATCTGTGTGTCAGAATTGTACACTAGGTAATTACTGAATCTACTGACACTGTAGATATCCTTTCTTTCTGCAAAGTCCCCTCACTCTCATTTCAGAGCTGGCAGCCTGTTCAGTTGGTCTCTTTCTTTCATATGCTGCTTTTTTCCTGAGTGTTGGGACAAAGGAGGCCCCTCTCCCCAGTAGGGATAGCTCAGAGCagcagagaaggaaagagggagggggatatGGAAGGAGGGGTCCCATTCGCCCAGCTGCACCCAGACTGGACCTTCTGTGCCTGTGACAGAGGGGTGGGGCGGTCAGCAGCCCACGCCGGGACTCTGTCTCACCCCCCCATTCAGCACCAGGGTCGCCACATGGTCCGCACCTGGACCGGCCAATTTGCCTAATTATCAATGAGTCTCTCCGGGCCGTGTCCGAGCACTCCGGGCCCACGCCACCGCTGGGCCCAGACAATACGCCCCACTCAGGGAGGCAATGCATTCTGGGTCAGCTGCAGTCATTACTACCTTCAACAGCCAACGATCGAACAGTAAGCGGggcggggcggggggggggggggttaagccACTCCCAAAGAAAATAGAAAAAGAGGGGGCTATTAAACACCTGCTTCTGCACAGCTCTGATAATTAGAGGCCTCTGAGCTAAAATACAAAGCTGCTGGACGGGGGTGGCGAGGGAGCTCTGTGGATGGTGGTACTGTATTCTAGGAGCTTTTTGCCCATTTAGGCACACTCTATTACCAATTCAGAGAACagctcagtgttttcctcagCTTCTGTCCACTCTAATGGCTAACGCTCTAACTGCGCAAACCTCAGAGAGATGCCTGTCAAAAGTGGCTCTCGTTTTTGTCCTACATCGTTCAGATAACAGCTAAATTACCACATAAGACAATAAAGTGGGTATAAGTTGGCTTTGAAATTAGTCCATCGGGGAGACGGATCTCCCAAATTAGCCAACTGGACGAATTCCAAGGCTTTTGACCTCACAAATGAAATCAGTGCTTAACACCGGTGAAAGAAACATGCTTTTCAAGTGCCACGAGGAACAGGCATCGCTGAAACTTTTCACCAAACTGCAGTGATATTTCAGCAATACAATGTGTAGCATTCATTCATTCACCTCTTTGTGAAAAAGGAAATCTGTAAGACATATCTGCATAAAGAAAGGCGTTTGTCTGCTGTCCCATATTGTTACCATTCTAACAGGTGTTTAGGGAGGACTACCAGGTATAACAACGAGCTTGTAAAGGGACACAAATGTCAGAAAGATGACAATGATGGAATAGTCTGTCCTTCGATTGGAACAAATTTAGACTTTCAATGACAATATCAAAGCTTGTTCCATTTTTTCGAGCCACATTGAGGGATTTGCCTTTTCATCAGCTACGTCATTTTTCTGGATGATTGACAATCATTAATCTGACTATCCGAAACTAAGACGATTATAAGGTGCAATGAAAGATTAAATCTTTTTCCTTCTGTTTGATTTTGACTTCCCATATCATTCAGGTACAGATAAGATACCAGGGAGTTAAACTGAACCTCAATGATCACCTCCTTCCTTTTCTCCATATAAAACCACTTCATGGTAAAATAAATCTGAATCGTAAAATGTTCACGTTCCTACTACTCCGCCCATACTGTGATTCGTGAATgaaaaacagcagcagtaaaaaaaactgaaaaaatgctAGGTACTATACTTTTCTTATAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154584 True 7541 lncRNA 0.42 1 32994377 33001917

Neighbor

gene id symbol gene type direction distance location
LOC110487461 LOC106605311 coding downstream 25888 32939047 ~ 32968489 (-)
LOC110487437 LOC105030512 coding downstream 104992 32853454 ~ 32889385 (-)
LOC110487370 nes coding downstream 126166 32855765 ~ 32868211 (-)
LOC110487362 NA coding downstream 218856 32770410 ~ 32775521 (-)
LOC110514821 NA coding downstream 237511 32738829 ~ 32756992 (-)
LOC110487493 LOC106580659 coding upstream 212 33002129 ~ 33010958 (-)
LOC110487486 raa2a coding upstream 10450 33012367 ~ 33018172 (-)
LOC110487507 LOC106580651 coding upstream 15218 33017135 ~ 33020297 (-)
LOC110487525 LOC106605242 coding upstream 18904 33020821 ~ 33027137 (-)
LOC110487583 LOC106605302 coding upstream 55088 33057005 ~ 33074880 (-)
G134253 NA non-coding downstream 12098 32981056 ~ 32982279 (-)
G134254 NA non-coding downstream 12489 32981436 ~ 32981888 (-)
G134182 NA non-coding downstream 102461 32891715 ~ 32891916 (-)
G134160 LOC106605316 non-coding downstream 142267 32848453 ~ 32852110 (-)
G134227 m4a8a non-coding upstream 29332 33031249 ~ 33049593 (-)
G134231 NA non-coding upstream 83018 33084935 ~ 33106505 (-)
LOC110487587 LOC106605297 non-coding upstream 142486 33144374 ~ 33173493 (-)
G134361 NA non-coding upstream 229079 33230996 ~ 33231201 (-)
G134364 NA non-coding upstream 234048 33235965 ~ 33236189 (-)
G134102 NA other downstream 206256 32748208 ~ 32788121 (-)
LOC110486999 prdm1 other downstream 1345582 31631886 ~ 31648795 (-)
G132197 NA other downstream 1451368 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 1795565 31196917 ~ 31199241 (-)
LOC110487618 LOC100380645 other upstream 210747 33208500 ~ 33225125 (-)
G134668 NA other upstream 863571 33865488 ~ 33865937 (-)
G135575 NA other upstream 1602298 34604215 ~ 34604478 (-)
G136399 psmc4 other upstream 2304450 35306367 ~ 35307729 (-)
drd2l LOC106582624 other upstream 2672381 35674291 ~ 35700846 (-)

Expression


Co-expression Network