G133417


Basic Information

Item Value
gene id G133417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33083348 ~ 33083575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153647
ACAAAAAATAGACAATAGGCTACATGCACTGAGTAtagcaaacattaggaacaccttcctaatattgagaggTGTGTGGACTTGATTAGCATGTACATTATATTTCCTCAAATGAAAGGTTATCAAAAACGGTTGTGTCTTCTCATGTTGAATGGCTGTTGAAATAGAAGATTAGCTCAATGCTATTGACCACACTTGATCTTTCTGACCTTGGACTCTAGCTATAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153647 True 228 lncRNA 0.36 1 33083348 33083575

Neighbor

gene id symbol gene type direction distance location
tmem176l.1 m4a8a coding upstream 34060 33045832 ~ 33049288 (+)
LOC110487536 NA coding upstream 37627 33028873 ~ 33045721 (+)
LOC110487571 m4a8a coding upstream 49495 33030310 ~ 33033853 (+)
LOC110487479 LOC106605309 coding upstream 81342 32988834 ~ 33002008 (+)
LOC110487447 LOC106605310 coding upstream 143538 32896415 ~ 32939810 (+)
LOC110487588 NA coding downstream 46742 33130317 ~ 33160062 (+)
LOC110487649 LOC106581815 coding downstream 232715 33316290 ~ 33321834 (+)
LOC110487688 LOC106605287 coding downstream 323234 33406809 ~ 33408519 (+)
ntrk1 LOC106605284 coding downstream 351123 33434698 ~ 33460997 (+)
LOC118939517 NA coding downstream 448015 33531590 ~ 33540695 (+)
G133415 NA non-coding upstream 1366 33081687 ~ 33081982 (+)
G133272 NA non-coding upstream 70439 33011062 ~ 33012909 (+)
G133374 NA non-coding upstream 101320 32981182 ~ 32982028 (+)
G133324 NA non-coding upstream 238814 32844251 ~ 32844534 (+)
G133432 LOC106605295 non-coding downstream 19355 33102930 ~ 33135626 (+)
G133439 NA non-coding downstream 60799 33144374 ~ 33173378 (+)
G133520 NA non-coding downstream 161422 33244997 ~ 33245280 (+)
G133523 NA non-coding downstream 169512 33253087 ~ 33253306 (+)
G132342 LOC100136303 other upstream 1195776 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1717026 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1790314 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 2333394 30748055 ~ 30749954 (+)
G131491 NA other upstream 2382725 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 83863 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 412879 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 730458 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 878842 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1604380 34687955 ~ 34692286 (+)

Expression


Co-expression Network