Gene
RNA
| Item | Value |
|---|---|
| gene id | G134364 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 33235965 ~ 33236189 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154724 | True | 225 | lncRNA | 0.42 | 1 | 33235965 | 33236189 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487618 | LOC100380645 | coding | downstream | 10840 | 33208500 ~ 33225125 (-) |
| LOC110487594 | LOC106605294 | coding | downstream | 62996 | 33164978 ~ 33172969 (-) |
| LOC110487587 | LOC106605297 | coding | downstream | 80356 | 33144374 ~ 33173493 (-) |
| LOC110487585 | LOC106605295 | coding | downstream | 97987 | 33134138 ~ 33137978 (-) |
| LOC118936288 | LOC106605301 | coding | downstream | 155937 | 33075283 ~ 33080028 (-) |
| bola1 | bola1 | coding | upstream | 18367 | 33254556 ~ 33256182 (-) |
| sv2a | LOC106605292 | coding | upstream | 20285 | 33256474 ~ 33313903 (-) |
| LOC110534759 | LOC106605290 | coding | upstream | 90823 | 33327012 ~ 33357457 (-) |
| LOC110487659 | LOC106605289 | coding | upstream | 122970 | 33359159 ~ 33391810 (-) |
| rbm8a | rbm8a | coding | upstream | 164586 | 33400775 ~ 33404514 (-) |
| G134361 | NA | non-coding | downstream | 4764 | 33230996 ~ 33231201 (-) |
| G134231 | NA | non-coding | downstream | 129460 | 33084935 ~ 33106505 (-) |
| G134227 | m4a8a | non-coding | downstream | 186372 | 33031249 ~ 33049593 (-) |
| G134229 | NA | non-coding | downstream | 234048 | 32994377 ~ 33001917 (-) |
| G134367 | NA | non-coding | upstream | 13731 | 33249920 ~ 33250188 (-) |
| G134369 | NA | non-coding | upstream | 17024 | 33253213 ~ 33253422 (-) |
| G134379 | NA | non-coding | upstream | 50550 | 33286739 ~ 33287261 (-) |
| G134385 | NA | non-coding | upstream | 56655 | 33292844 ~ 33293687 (-) |
| G134102 | NA | other | downstream | 447844 | 32748208 ~ 32788121 (-) |
| LOC110514821 | NA | other | downstream | 484387 | 32738829 ~ 32756992 (-) |
| LOC110486999 | prdm1 | other | downstream | 1587170 | 31631886 ~ 31648795 (-) |
| G132197 | NA | other | downstream | 1692956 | 31536047 ~ 31543009 (-) |
| G134668 | NA | other | upstream | 629299 | 33865488 ~ 33865937 (-) |
| G135575 | NA | other | upstream | 1368026 | 34604215 ~ 34604478 (-) |
| G136399 | psmc4 | other | upstream | 2070178 | 35306367 ~ 35307729 (-) |
| drd2l | LOC106582624 | other | upstream | 2438109 | 35674291 ~ 35700846 (-) |
| G137479 | NA | other | upstream | 3133815 | 36370004 ~ 36370328 (-) |
