G133542


Basic Information

Item Value
gene id G133542
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33292540 ~ 33294126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153795
catcaacaacagtcacccacgaagcatcgttacccattgctccacaaaagccgcggcccttgcagagcaaggggaaccactacttcaaggtctcagagcaagtgacgtcactgattgaaacgctatttagcgcgcaccgctaactaagctagccgtttcacatcggttacatctaTTGAGTGTCGAGTGTGTGTCTAGTGAGTGTCTAGTGAGTGTCTAGTGAGTGTCTAGTGAGTGTCTAGTGTTTGTCTAGTGAGTGTCTAGTGAGTGTCTAATTAGTGTGGCCCCCTTTTCACATTTCCTTCCCTATTTTTCCTTTTTCTCTACTCATCTCAGCCTCTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153795 True 342 lncRNA 0.41 2 33292540 33294126

Neighbor

gene id symbol gene type direction distance location
LOC110487588 NA coding upstream 132478 33130317 ~ 33160062 (+)
tmem176l.1 m4a8a coding upstream 243252 33045832 ~ 33049288 (+)
LOC110487536 NA coding upstream 246819 33028873 ~ 33045721 (+)
LOC110487571 m4a8a coding upstream 258687 33030310 ~ 33033853 (+)
LOC110487479 LOC106605309 coding upstream 290534 32988834 ~ 33002008 (+)
LOC110487649 LOC106581815 coding downstream 22164 33316290 ~ 33321834 (+)
LOC110487688 LOC106605287 coding downstream 112683 33406809 ~ 33408519 (+)
ntrk1 LOC106605284 coding downstream 140572 33434698 ~ 33460997 (+)
LOC118939517 NA coding downstream 237464 33531590 ~ 33540695 (+)
LOC110487797 LOC106605278 coding downstream 374017 33668143 ~ 33694941 (+)
G133527 NA non-coding upstream 28373 33263613 ~ 33264167 (+)
G133525 NA non-coding upstream 31808 33256492 ~ 33260732 (+)
G133523 NA non-coding upstream 39234 33253087 ~ 33253306 (+)
G133520 NA non-coding upstream 47260 33244997 ~ 33245280 (+)
G133439 NA non-coding upstream 119162 33144374 ~ 33173378 (+)
G133563 NA non-coding downstream 29017 33323143 ~ 33323421 (+)
G133564 NA non-coding downstream 30553 33324679 ~ 33324919 (+)
G133565 NA non-coding downstream 31014 33325140 ~ 33325355 (+)
G133566 NA non-coding downstream 31903 33326029 ~ 33326349 (+)
G133567 LOC106605290 non-coding downstream 32917 33327043 ~ 33329134 (+)
G133473 LOC106605294 other upstream 123162 33167438 ~ 33169378 (+)
G132342 LOC100136303 other upstream 1404968 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1926218 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1999506 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 2542586 30748055 ~ 30749954 (+)
G133663 LOC106605282 other downstream 202328 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 519907 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 668291 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1393829 34687955 ~ 34692286 (+)
G135916 NA other downstream 1677514 34971640 ~ 34971931 (+)

Expression


Co-expression Network