G133566


Basic Information

Item Value
gene id G133566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33326029 ~ 33326349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU153823
AGACATGGACTGTTTTCCATGCTCCGTCTGGCAGGCGGTACAGGTGCTTCAAGGCTCAGACTAACAGAGTccgaaacagcttctatcccctggccataagactaactggtcatccccaaagccaacacctcctttggtcacctttccttccagttctctgctgccaatgactgaaacgaattgcaaaaatcactgaagttggagacctatatctccctcactaactttaagcatcagctgtcagagcagcttaccgattgcagcagctgtacacagcccatccaaccaactactacctcatccccacatttgtttttgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153823 True 321 lncRNA 0.40 1 33326029 33326349

Neighbor

gene id symbol gene type direction distance location
LOC110487649 LOC106581815 coding upstream 4195 33316290 ~ 33321834 (+)
LOC110487588 NA coding upstream 165967 33130317 ~ 33160062 (+)
tmem176l.1 m4a8a coding upstream 276741 33045832 ~ 33049288 (+)
LOC110487536 NA coding upstream 280308 33028873 ~ 33045721 (+)
LOC110487688 LOC106605287 coding downstream 80460 33406809 ~ 33408519 (+)
ntrk1 LOC106605284 coding downstream 108349 33434698 ~ 33460997 (+)
LOC118939517 NA coding downstream 205241 33531590 ~ 33540695 (+)
LOC110487797 LOC106605278 coding downstream 341794 33668143 ~ 33694941 (+)
LOC110487856 LOC106581981 coding downstream 393484 33719833 ~ 33726238 (+)
G133565 NA non-coding upstream 674 33325140 ~ 33325355 (+)
G133564 NA non-coding upstream 1110 33324679 ~ 33324919 (+)
G133563 NA non-coding upstream 2608 33323143 ~ 33323421 (+)
G133542 NA non-coding upstream 31903 33292540 ~ 33294126 (+)
G133527 NA non-coding upstream 61862 33263613 ~ 33264167 (+)
G133567 LOC106605290 non-coding downstream 694 33327043 ~ 33329134 (+)
G133552 NA non-coding downstream 32809 33359158 ~ 33359718 (+)
G133551 NA non-coding downstream 33629 33359978 ~ 33362906 (+)
G133648 LOC106605285 non-coding downstream 140381 33466730 ~ 33471416 (+)
G133655 NA non-coding downstream 155934 33482283 ~ 33482552 (+)
G133473 LOC106605294 other upstream 156651 33167438 ~ 33169378 (+)
G132342 LOC100136303 other upstream 1438457 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1959707 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 2032995 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 2576075 30748055 ~ 30749954 (+)
G133663 LOC106605282 other downstream 170105 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 487684 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 636068 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1361606 34687955 ~ 34692286 (+)
G135916 NA other downstream 1645291 34971640 ~ 34971931 (+)

Expression


Co-expression Network