Gene
RNA
| Item | Value |
|---|---|
| gene id | G133663 |
| gene name | LOC106605282 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 33496454 ~ 33497285 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein SMG5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153923 | True | 792 | TUCP | 0.65 | 2 | 33496454 | 33497285 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ntrk1 | LOC106605284 | coding | upstream | 35457 | 33434698 ~ 33460997 (+) |
| LOC110487688 | LOC106605287 | coding | upstream | 87935 | 33406809 ~ 33408519 (+) |
| LOC110487649 | LOC106581815 | coding | upstream | 174620 | 33316290 ~ 33321834 (+) |
| LOC110487588 | NA | coding | upstream | 336392 | 33130317 ~ 33160062 (+) |
| tmem176l.1 | m4a8a | coding | upstream | 447166 | 33045832 ~ 33049288 (+) |
| LOC118939517 | NA | coding | downstream | 34305 | 33531590 ~ 33540695 (+) |
| LOC110487797 | LOC106605278 | coding | downstream | 170858 | 33668143 ~ 33694941 (+) |
| LOC110487856 | LOC106581981 | coding | downstream | 222548 | 33719833 ~ 33726238 (+) |
| tap1 | tap1 | coding | downstream | 236159 | 33733444 ~ 33746441 (+) |
| LOC110487876 | NA | coding | downstream | 252362 | 33749647 ~ 33758792 (+) |
| G133655 | NA | non-coding | upstream | 13902 | 33482283 ~ 33482552 (+) |
| G133648 | LOC106605285 | non-coding | upstream | 25038 | 33466730 ~ 33471416 (+) |
| G133551 | NA | non-coding | upstream | 133548 | 33359978 ~ 33362906 (+) |
| G133552 | NA | non-coding | upstream | 136736 | 33359158 ~ 33359718 (+) |
| G133567 | LOC106605290 | non-coding | upstream | 167320 | 33327043 ~ 33329134 (+) |
| G133670 | NA | non-coding | downstream | 6859 | 33504144 ~ 33504466 (+) |
| G133676 | NA | non-coding | downstream | 12260 | 33509545 ~ 33509807 (+) |
| G133677 | NA | non-coding | downstream | 15027 | 33512312 ~ 33512793 (+) |
| G133678 | NA | non-coding | downstream | 16048 | 33513333 ~ 33513862 (+) |
| G133699 | NA | non-coding | downstream | 62646 | 33559931 ~ 33560301 (+) |
| G133473 | LOC106605294 | other | upstream | 327076 | 33167438 ~ 33169378 (+) |
| G132342 | LOC100136303 | other | upstream | 1608882 | 31834170 ~ 31887572 (+) |
| eaf1 | LOC106581241 | other | upstream | 2130132 | 31360408 ~ 31366322 (+) |
| LOC110534710 | LOC106605356 | other | upstream | 2203420 | 31262054 ~ 31294577 (+) |
| G131517 | ccne2 | other | upstream | 2746500 | 30748055 ~ 30749954 (+) |
| G133760 | LOC106605274 | other | downstream | 316748 | 33814033 ~ 33814483 (+) |
| G134735 | LOC100136012 | other | downstream | 465132 | 33962417 ~ 33962658 (+) |
| si:dkey-30e9.6 | LOC106605205 | other | downstream | 1190670 | 34687955 ~ 34692286 (+) |
| G135916 | NA | other | downstream | 1474355 | 34971640 ~ 34971931 (+) |
| G135920 | LOC106605214 | other | downstream | 1475164 | 34972449 ~ 34972801 (+) |
