G133781


Basic Information

Item Value
gene id G133781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33677384 ~ 33680485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU154062
ACGTTGTGCTTCCTGTGTTTGTCTCCGCTCATTATGTACTTCCTCTATGGAGAGAAAAGATGGAAATATAGAGACAAGGAGCATGTTGAATCATGAGAGAGGTTCCACATAAAGAGTATAAACATTGAGTTAACTAGCAGCGATGAGTTAAACTAGCAGCGATGGAAAAAGTGGGCAAATGAAAGAAAACATGAAATCTGTAAACATGAGCAGACAAAATGGGAGATTTGAATGATGCGGTATCTGAGGAGAGTCAAGCAAATTTCCTTATCAAGATGTTTCTCATGGAATGAACCTCAGCCACTTACTCCCATGATTATTATCATCTGCTCCGTGAGCCAGCTTTTCCTTACAGCGGAGCAGCCAAGTCCTTGTATTGATTGTTGGGGAAAATGCACTCAAACAGATTCAAAGATTTTGTGCATTTGGTAGAACAGAAACACTGTAGGGGTTGTTACATGCCACAATATTAGACATCCTCATTGGTGCCTCCCTGTTCCATCGCCACTCACAGACTGAGATGTGGTGATTGTGGTTGGTTGAGGTTGACACGGATGGTCCCAAGTAAGTGGTTCTActgtaggtaactgtacCAGGAAGAGTTGTGGGTAAACTTAACCTTAGACCTACTGCTTGAGACAAAAACATAATACCATAgaaaagtaggcctacagtagaccTATGTTAAAAATGTAAACAAGTTGTATTTTGCCTTACTTTTACAACTGCAGTCTCTTAGAAACAGAGACTGTGCTGTTAGCCTAGTTTGTAACTGATTAGTTGAATGCACAGtgctactgtaggcctacagtacaaaGCCTGTAGTCACTGTTTTGTGTGACCTGATGTAGGCTAGCATTGATGACAACACAGAAATAATAATCTCTATAAGTCCTGTGTATTATATTCTTTCTGTGTACATTAAGGTGAATAAACCAAGGCTATAAATCATCTTCAACTGGTTTGCAGTCCATGTATTTACACAACCTTCCTTCTGTCTGTTGCATAGAGTCATATGTGTGCAGACAGTGTGGTTATAGGTGCCGGTAAGCACAGGCTCACAAAGGCTAGTAGTCTATGCTAGCTAGagttcaaatccaattttatttatcACAGGCGCCGGATAccaatggtgtaaagtacttaagtaaaaatactttaaagtactacttaagtctttTTTTgtggatatctgtactttactatttatatttttgactacttttacttcactatattccttaagaaaatattgtaagttttactccatacatttttcttaacacccaaaagtacttgttacattttgagtgcttagcaggacaggacaatagtcaaattcacacacttatcaaacaaacatccctggtcacccctactgcctctgatctggcggactcactaaccaacatgctttgtttgtaaatgatgtaaATGGATTtccataaataaaaaaaaacaaaaaaatggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154062 True 1473 lncRNA 0.41 2 33677384 33680485

Neighbor

gene id symbol gene type direction distance location
LOC118939517 NA coding upstream 136689 33531590 ~ 33540695 (+)
ntrk1 LOC106605284 coding upstream 216387 33434698 ~ 33460997 (+)
LOC110487688 LOC106605287 coding upstream 268865 33406809 ~ 33408519 (+)
LOC110487649 LOC106581815 coding upstream 355550 33316290 ~ 33321834 (+)
LOC110487588 NA coding upstream 517322 33130317 ~ 33160062 (+)
LOC110487856 LOC106581981 coding downstream 39348 33719833 ~ 33726238 (+)
tap1 tap1 coding downstream 52959 33733444 ~ 33746441 (+)
LOC110487876 NA coding downstream 69162 33749647 ~ 33758792 (+)
LOC110487915 LOC106582023 coding downstream 193420 33873905 ~ 33880108 (+)
LOC110487926 LOC106605271 coding downstream 207354 33887839 ~ 33945400 (+)
G133725 NA non-coding upstream 83394 33593623 ~ 33593990 (+)
G133699 NA non-coding upstream 117083 33559931 ~ 33560301 (+)
G133678 NA non-coding upstream 163522 33513333 ~ 33513862 (+)
G133677 NA non-coding upstream 164591 33512312 ~ 33512793 (+)
G133676 NA non-coding upstream 167577 33509545 ~ 33509807 (+)
G133785 NA non-coding downstream 60109 33740594 ~ 33742572 (+)
G133759 LOC106605274 non-coding downstream 98751 33779236 ~ 33783239 (+)
G133844 NA non-coding downstream 118375 33798860 ~ 33799090 (+)
G133847 NA non-coding downstream 121469 33801954 ~ 33802157 (+)
G133852 NA non-coding downstream 126849 33807334 ~ 33807657 (+)
G133663 LOC106605282 other upstream 180099 33496454 ~ 33497285 (+)
G133473 LOC106605294 other upstream 508006 33167438 ~ 33169378 (+)
G132342 LOC100136303 other upstream 1789812 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 2311062 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 2384350 31262054 ~ 31294577 (+)
G133760 LOC106605274 other downstream 133548 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 281932 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1007470 34687955 ~ 34692286 (+)
G135916 NA other downstream 1291155 34971640 ~ 34971931 (+)
G135920 LOC106605214 other downstream 1291964 34972449 ~ 34972801 (+)

Expression


Co-expression Network