G133844


Basic Information

Item Value
gene id G133844
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33798860 ~ 33799090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU154128
aggaccttgggatgcttcttacggagccactccttagttgccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccacgacccatcttcaatgctcttactgagggaaggaggttgttggccaagatctcgcgatacatggccccatccatcctcccctcaatacgatgcagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154128 True 231 lncRNA 0.39 1 33798860 33799090

Neighbor

gene id symbol gene type direction distance location
LOC110487876 NA coding upstream 40068 33749647 ~ 33758792 (+)
tap1 tap1 coding upstream 52419 33733444 ~ 33746441 (+)
LOC110487856 LOC106581981 coding upstream 72622 33719833 ~ 33726238 (+)
LOC110487797 LOC106605278 coding upstream 103919 33668143 ~ 33694941 (+)
LOC118939517 NA coding upstream 258165 33531590 ~ 33540695 (+)
LOC110487915 LOC106582023 coding downstream 74815 33873905 ~ 33880108 (+)
LOC110487926 LOC106605271 coding downstream 88749 33887839 ~ 33945400 (+)
LOC118939520 NA coding downstream 365596 34164350 ~ 34169250 (+)
LOC110488005 rab5a coding downstream 377953 34177043 ~ 34185964 (+)
ube2e2 LOC106582102 coding downstream 487360 34279641 ~ 34317474 (+)
G133759 LOC106605274 non-coding upstream 15621 33779236 ~ 33783239 (+)
G133785 NA non-coding upstream 56288 33740594 ~ 33742572 (+)
G133761 LOC106605277 non-coding upstream 83782 33634159 ~ 33715078 (+)
G133781 NA non-coding upstream 118375 33677384 ~ 33680485 (+)
G133725 NA non-coding upstream 204870 33593623 ~ 33593990 (+)
G133847 NA non-coding downstream 2864 33801954 ~ 33802157 (+)
G133852 NA non-coding downstream 8244 33807334 ~ 33807657 (+)
G133854 NA non-coding downstream 10514 33809604 ~ 33809899 (+)
G133855 NA non-coding downstream 13549 33812639 ~ 33812922 (+)
G133856 NA non-coding downstream 15538 33814628 ~ 33814845 (+)
G133663 LOC106605282 other upstream 301575 33496454 ~ 33497285 (+)
G133473 LOC106605294 other upstream 629482 33167438 ~ 33169378 (+)
G132342 LOC100136303 other upstream 1911288 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 2432538 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 2505826 31262054 ~ 31294577 (+)
G133760 LOC106605274 other downstream 14943 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 163327 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 888865 34687955 ~ 34692286 (+)
G135916 NA other downstream 1172550 34971640 ~ 34971931 (+)
G135920 LOC106605214 other downstream 1173359 34972449 ~ 34972801 (+)

Expression


Co-expression Network