Gene
RNA
| Item | Value |
|---|---|
| gene id | G133847 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 33801954 ~ 33802157 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154131 | True | 204 | lncRNA | 0.32 | 1 | 33801954 | 33802157 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487876 | NA | coding | upstream | 43162 | 33749647 ~ 33758792 (+) |
| tap1 | tap1 | coding | upstream | 55513 | 33733444 ~ 33746441 (+) |
| LOC110487856 | LOC106581981 | coding | upstream | 75716 | 33719833 ~ 33726238 (+) |
| LOC110487797 | LOC106605278 | coding | upstream | 107013 | 33668143 ~ 33694941 (+) |
| LOC118939517 | NA | coding | upstream | 261259 | 33531590 ~ 33540695 (+) |
| LOC110487915 | LOC106582023 | coding | downstream | 71748 | 33873905 ~ 33880108 (+) |
| LOC110487926 | LOC106605271 | coding | downstream | 85682 | 33887839 ~ 33945400 (+) |
| LOC118939520 | NA | coding | downstream | 362529 | 34164350 ~ 34169250 (+) |
| LOC110488005 | rab5a | coding | downstream | 374886 | 34177043 ~ 34185964 (+) |
| ube2e2 | LOC106582102 | coding | downstream | 484293 | 34279641 ~ 34317474 (+) |
| G133844 | NA | non-coding | upstream | 2864 | 33798860 ~ 33799090 (+) |
| G133759 | LOC106605274 | non-coding | upstream | 18715 | 33779236 ~ 33783239 (+) |
| G133785 | NA | non-coding | upstream | 59382 | 33740594 ~ 33742572 (+) |
| G133761 | LOC106605277 | non-coding | upstream | 86876 | 33634159 ~ 33715078 (+) |
| G133781 | NA | non-coding | upstream | 121469 | 33677384 ~ 33680485 (+) |
| G133852 | NA | non-coding | downstream | 5177 | 33807334 ~ 33807657 (+) |
| G133854 | NA | non-coding | downstream | 7447 | 33809604 ~ 33809899 (+) |
| G133855 | NA | non-coding | downstream | 10482 | 33812639 ~ 33812922 (+) |
| G133856 | NA | non-coding | downstream | 12471 | 33814628 ~ 33814845 (+) |
| G133857 | NA | non-coding | downstream | 14012 | 33816169 ~ 33816474 (+) |
| G133663 | LOC106605282 | other | upstream | 304669 | 33496454 ~ 33497285 (+) |
| G133473 | LOC106605294 | other | upstream | 632576 | 33167438 ~ 33169378 (+) |
| G132342 | LOC100136303 | other | upstream | 1914382 | 31834170 ~ 31887572 (+) |
| eaf1 | LOC106581241 | other | upstream | 2435632 | 31360408 ~ 31366322 (+) |
| LOC110534710 | LOC106605356 | other | upstream | 2508920 | 31262054 ~ 31294577 (+) |
| G133760 | LOC106605274 | other | downstream | 11876 | 33814033 ~ 33814483 (+) |
| G134735 | LOC100136012 | other | downstream | 160260 | 33962417 ~ 33962658 (+) |
| si:dkey-30e9.6 | LOC106605205 | other | downstream | 885798 | 34687955 ~ 34692286 (+) |
| G135916 | NA | other | downstream | 1169483 | 34971640 ~ 34971931 (+) |
| G135920 | LOC106605214 | other | downstream | 1170292 | 34972449 ~ 34972801 (+) |
